Variant report

Variant	nsv963269
Chromosome Location	chr3:86891863-86892959
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 75 )

Variant overlapped rSNPs/rCNVs (count:48 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11295787	chr3:86891954-86891955	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs570917862	chr3:86891961-86891962	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs189775016	chr3:86891976-86891977	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs113209704	chr3:86891985-86891986	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs555127264	chr3:86891990-86891991	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs9310034	chr3:86892018-86892019	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs180841907	chr3:86892063-86892064	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs554394787	chr3:86892065-86892066	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs9310035	chr3:86892083-86892084	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs376975236	chr3:86892084-86892085	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs564857544	chr3:86892095-86892096	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs532219214	chr3:86892114-86892115	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs28602292	chr3:86892127-86892128	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs543939721	chr3:86892134-86892135	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs562492071	chr3:86892143-86892144	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs374041338	chr3:86892198-86892199	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs529668449	chr3:86892231-86892232	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs548910981	chr3:86892240-86892241	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs185427081	chr3:86892243-86892244	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs9682583	chr3:86892316-86892317	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs9681954	chr3:86892364-86892365	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs570890641	chr3:86892378-86892379	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs540164182	chr3:86892380-86892381	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs538352229	chr3:86892392-86892393	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs115117355	chr3:86892452-86892453	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs548759033	chr3:86892462-86892463	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs568116428	chr3:86892506-86892507	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs190927426	chr3:86892527-86892528	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs559397684	chr3:86892577-86892578	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs554490758	chr3:86892585-86892586	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs183447441	chr3:86892609-86892610	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs150761262	chr3:86892619-86892620	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs540089524	chr3:86892634-86892635	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs558735003	chr3:86892650-86892651	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs576936519	chr3:86892684-86892685	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs560036161	chr3:86892694-86892695	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs544300226	chr3:86892699-86892700	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs373593468	chr3:86892705-86892706	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs139794253	chr3:86892725-86892726	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs541841838	chr3:86892727-86892728	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs185937114	chr3:86892779-86892780	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs527967798	chr3:86892813-86892814	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs552560043	chr3:86892854-86892855	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs191893998	chr3:86892861-86892862	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs144694054	chr3:86892884-86892885	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs549871998	chr3:86892901-86892902	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs568213091	chr3:86892928-86892929	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs535486143	chr3:86892943-86892944	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:75)

Disease	PMID	Source
Glioblastoma multiforme	21080181	CNVD
Melanoma	18172304	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Acute myeloid leukemia	20729466	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Metanephric adenoma	20802469	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Wilms tumour	21544195	CNVD
Colorectal cancer	16272173	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Soft tissue tumor	16732325	CNVD
small cell lung cancer	20016488	CNVD
Neurodevelopmental disorder	22521361	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Mental retardation	17124404	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
craniofacial dysmorphism	21918468	CNVD
Cancer	20164920	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:86888200-86899600	Weak transcription	Pancreatic Islets	Pancreatic Islet

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