Variant report

Variant	nsv964277
Chromosome Location	chr4:91110907-91112907
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 68 )
Associated
traits (count: 86 )

Variant overlapped rSNPs/rCNVs (count:68 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs114234479	chr4:91110912-91110913	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs150919430	chr4:91110962-91110963	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs183836336	chr4:91110964-91110965	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs550565006	chr4:91111011-91111012	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs570884954	chr4:91111035-91111036	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs115099232	chr4:91111046-91111047	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs10516866	chr4:91111054-91111055	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs78876299	chr4:91111063-91111064	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs71596518	chr4:91111153-91111154	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs536139530	chr4:91111165-91111166	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs114399097	chr4:91111180-91111181	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs576027769	chr4:91111198-91111199	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs116104303	chr4:91111202-91111203	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs550657052	chr4:91111205-91111206	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs569461592	chr4:91111315-91111316	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs77204561	chr4:91111371-91111372	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs545612298	chr4:91111452-91111453	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs186695155	chr4:91111459-91111460	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs559485683	chr4:91111466-91111467	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs11723152	chr4:91111508-91111509	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs11940651	chr4:91111521-91111522	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs191103043	chr4:91111618-91111619	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs17016622	chr4:91111631-91111632	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs530723587	chr4:91111638-91111639	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs544191140	chr4:91111649-91111650	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs558446553	chr4:91111692-91111693	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs184072631	chr4:91111736-91111737	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs535758235	chr4:91111742-91111743	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs74556712	chr4:91111759-91111760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs140705920	chr4:91111798-91111799	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs149754228	chr4:91111803-91111804	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs562393467	chr4:91111805-91111806	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs569528448	chr4:91111849-91111850	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs79342139	chr4:91111935-91111936	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs553042688	chr4:91111967-91111968	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs146749145	chr4:91112064-91112065	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs570388869	chr4:91112069-91112070	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs562374696	chr4:91112091-91112092	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs555684861	chr4:91112105-91112106	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs140352554	chr4:91112120-91112121	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs188413297	chr4:91112121-91112122	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs572609441	chr4:91112132-91112133	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs541972534	chr4:91112134-91112135	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs557075196	chr4:91112192-91112193	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs541584285	chr4:91112233-91112234	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs191620593	chr4:91112299-91112300	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs369907005	chr4:91112332-91112333	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs572686479	chr4:91112363-91112364	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs575179951	chr4:91112409-91112410	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs185394948	chr4:91112445-91112446	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:86)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	17603634	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Parkinson disease	18923514	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Cancer	21183584	CNVD
Breast cancer	16272173	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Myelodysplastic syndrome	21251322	CNVD
Multiple myeloma	17550852	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Autism	18414403	CNVD
primary effusion lymphomas	17116491	CNVD
Mental retardation	20522426	CNVD
delayed speech	20522426	CNVD
growth disorder	20522426	CNVD
Olfactory neuroblastoma	18408657	CNVD
small cell lung cancer	20016488	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17133270	CNVD
Colorectal cancer	20459617	CNVD
Acute monocytic leukemia	16498392	CNVD
Multiple myeloma	16616336	CNVD
Esophageal adenocarcinoma	18820669	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myelofibrosis	22110671	CNVD
Parkinson disease	20877625	CNVD
Hirschsprung''s Disease	21712996	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Breast cancer	17393978	CNVD
Ovarian cancer	21720365	CNVD
Obesity	20622171	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	17952125	CNVD
Autism	22495309	CNVD
Cancer	20164920	CNVD

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:91109200-91117200	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr4:91109200-91118800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr4:91109400-91119000	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr4:91110000-91111200	Enhancers	Stomach Mucosa	stomach
5	chr4:91110000-91111600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr4:91110600-91111000	Weak transcription	Fetal Brain Female	brain
7	chr4:91110800-91111400	Enhancers	Fetal Brain Male	brain
8	chr4:91111000-91111600	Enhancers	Fetal Brain Female	brain
9	chr4:91111400-91112200	Weak transcription	Fetal Brain Male	brain
10	chr4:91111600-91116200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr4:91112200-91112400	Enhancers	Fetal Brain Male	brain

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