Variant report

Variant	nsv965523
Chromosome Location	chr5:45306721-45326707
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 98 )
Associated
traits (count: 90 )

Variant overlapped rSNPs/rCNVs (count:98 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs141357797	chr5:45310828-45310829	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs185619478	chr5:45310866-45310867	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs547015348	chr5:45310904-45310905	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs558250456	chr5:45310932-45310933	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs570133648	chr5:45310935-45310936	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs370638097	chr5:45310949-45310950	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs539026845	chr5:45310992-45310993	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs374546715	chr5:45311005-45311006	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs367715724	chr5:45311053-45311054	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs373351498	chr5:45311071-45311072	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs199621998	chr5:45311103-45311104	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs115756418	chr5:45311113-45311114	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs564651910	chr5:45311114-45311115	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs555672395	chr5:45311120-45311121	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs572809528	chr5:45311165-45311166	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs77449460	chr5:45311178-45311179	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs190128738	chr5:45311195-45311196	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs554597616	chr5:45311202-45311203	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs558456203	chr5:45311236-45311237	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs150312610	chr5:45311246-45311247	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs543405242	chr5:45311288-45311289	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs550306087	chr5:45311293-45311294	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs563855288	chr5:45311318-45311319	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs569092905	chr5:45311335-45311336	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs574043535	chr5:45311380-45311381	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs574600540	chr5:45311427-45311428	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs368831156	chr5:45311463-45311464	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs373202383	chr5:45311498-45311499	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs182399454	chr5:45311515-45311516	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs527453735	chr5:45311525-45311526	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs376424118	chr5:45311532-45311533	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs144948346	chr5:45311569-45311570	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs185935497	chr5:45311573-45311574	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs529935716	chr5:45311576-45311577	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs191727803	chr5:45311578-45311579	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs184011502	chr5:45311580-45311581	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs548548802	chr5:45311585-45311586	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs80222056	chr5:45311647-45311648	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs549072533	chr5:45311682-45311683	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs566293373	chr5:45311694-45311695	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs535188120	chr5:45311716-45311717	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs114500741	chr5:45311765-45311766	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs578249930	chr5:45311779-45311780	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs537496432	chr5:45311833-45311834	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs143021737	chr5:45311836-45311837	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs116408800	chr5:45311853-45311854	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs553150483	chr5:45311872-45311873	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs559384711	chr5:45311953-45311954	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs571916640	chr5:45311991-45311992	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs374024233	chr5:45312012-45312013	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:90)

Disease	PMID	Source
Medulloblastoma	16783165	CNVD
Thyroid cancer	19087340	CNVD
Liposarcoma	21253554	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Cervical Cancer	21857958	CNVD
Cervical cancer	21062161	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Oral cancer	21386901	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Ewing''s sarcoma	17952124	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Cervical cancer	18559093	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Metanephric adenoma	20802469	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Colorectal cancer	21645411	CNVD
Gastric cancer	22152101	CNVD
Oesophago-gastric ulcer	22152101	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Multiple myeloma	17550852	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Bladder cancer	21909424	CNVD
DNA damage stimulus	22844521	CNVD
DNA repair	22844521	CNVD
Breast cancer	21785460	CNVD
Spinal muscular atrophy	22422766	CNVD
Spinal muscular atrophy	22558076	CNVD
Spinal muscular atrophy	21320981	CNVD
Spinal muscular atrophy	21762474	CNVD
Cancer	16751803	CNVD
Breast cancer	16608533	CNVD
Autism	22495311	CNVD
Intellectual disability	22102821	CNVD
Cervical squamous cell carcinoma	21590768	CNVD
Prostate cancer	21965145	CNVD
Cancer	21183584	CNVD
Ovarian cancer	20844748	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Breast cancer	17603634	CNVD
Melanoma	18172304	CNVD
Glioblastoma multiforme	22286061	CNVD
Lung cancer	18438408	CNVD
Glioma	20126413	CNVD
Non-small cell lung cancer	21829676	CNVD
Breast cancer	22032731	CNVD
Esophageal cancer	20955586	CNVD
Breast cancer	17133270	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Breast cancer	17393978	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Hirschsprung''s Disease	21712996	CNVD
Intellectual disability	21811512	CNVD
Lung adenocarcinoma	21935476	CNVD
Myelofibrosis	22110671	CNVD
Intracranial aneurysm	16715129	CNVD
Multiple myeloma	16616336	CNVD
Cancer	21359685	CNVD
adenomatous polyposis	22470819	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21364760	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Cancer	20164920	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:45310800-45312800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell

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