Variant report

Variant	nsv966000
Chromosome Location	chr21:15330676-15332050
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 58 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:58 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs184966562	chr21:15330696-15330697	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs142703986	chr21:15330713-15330714	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs144465380	chr21:15330715-15330716	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs148402641	chr21:15330724-15330725	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs565670422	chr21:15330757-15330758	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs3965631	chr21:15330767-15330768	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs534634826	chr21:15330839-15330840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs548319009	chr21:15330850-15330851	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs2822331	chr21:15330872-15330873	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs2822332	chr21:15330957-15330958	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs537140307	chr21:15330967-15330968	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs9978530	chr21:15330972-15330973	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs376770223	chr21:15330993-15330994	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs113927636	chr21:15331004-15331005	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs530281484	chr21:15331013-15331014	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs539477238	chr21:15331034-15331035	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs553021922	chr21:15331053-15331054	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs150584908	chr21:15331157-15331158	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs542159823	chr21:15331166-15331167	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs188577875	chr21:15331176-15331177	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs2822333	chr21:15331203-15331204	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs575786111	chr21:15331213-15331214	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs192832254	chr21:15331266-15331267	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs535379730	chr21:15331297-15331298	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs2822334	chr21:15331368-15331369	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs371217337	chr21:15331411-15331412	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs564268520	chr21:15331419-15331420	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs2822335	chr21:15331425-15331426	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs546553882	chr21:15331426-15331427	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs143346905	chr21:15331429-15331430	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs8134975	chr21:15331433-15331434	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs35938378	chr21:15331434-15331435	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs8134986	chr21:15331478-15331479	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs2822336	chr21:15331569-15331570	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs184411939	chr21:15331574-15331575	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs536879723	chr21:15331595-15331596	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs199561814	chr21:15331599-15331600	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs34762716	chr21:15331620-15331621	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs552227423	chr21:15331628-15331629	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs150008741	chr21:15331632-15331633	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs570530448	chr21:15331656-15331657	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs539563951	chr21:15331733-15331734	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs189626489	chr21:15331766-15331767	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs113964846	chr21:15331772-15331773	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs145209569	chr21:15331794-15331795	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs531523879	chr21:15331809-15331810	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs548550964	chr21:15331816-15331817	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs537040564	chr21:15331867-15331868	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs149133591	chr21:15331875-15331876	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs536134477	chr21:15331883-15331884	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Ovarian cancer	21720365	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Down syndrome	17412756	CNVD
Down syndrome	17576883	CNVD
Acute promyelocytic leukemia	19109227	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Sudden cardiac death	19188705	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Breast cancer	21509527	CNVD
T-cell lymphomas	19863542	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	17387387	CNVD
Renal cell carcinoma	19461508	CNVD
Seminomas	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Metanephric adenoma	20802469	CNVD
Neuroblastoma	18923191	CNVD
Prostate cancer	19156837	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Cancer	20164919	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	20409316	CNVD
Autism	18414403	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
lymphocytic leukemia	21291569	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute myeloid leukemia	21251322	CNVD
abnormal development	18461090	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21364760	CNVD
Melanoma	17363583	CNVD
Breast cancer	22522925	CNVD
Multiple myeloma	17550852	CNVD
Myelofibrosis	22110671	CNVD
Alzheimer''s disease	18923514	CNVD
Alzheimer''s disease	20877625	CNVD
Follicular lymphoma	20505157	CNVD
Alzheimer''s disease	21956041	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Melanoma	18172304	CNVD
Autism	22958593	CNVD
Schizophrenia	22958593	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:15310400-15347400	Weak transcription	Dnd41	blood

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