Variant report

Variant	nsv966001
Chromosome Location	chr21:15332050-15334848
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 160 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:160 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs560105164	chr21:15332059-15332060	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs529317506	chr21:15332060-15332061	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs367842250	chr21:15332113-15332114	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs371062537	chr21:15332143-15332144	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs2822337	chr21:15332152-15332153	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs2905909	chr21:15332172-15332173	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs566832820	chr21:15332178-15332179	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs199836918	chr21:15332194-15332195	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs561871833	chr21:15332223-15332224	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs183585059	chr21:15332227-15332228	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs573448045	chr21:15332243-15332244	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs368221850	chr21:15332267-15332268	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs550768758	chr21:15332321-15332322	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs372514014	chr21:15332337-15332338	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs374872119	chr21:15332355-15332356	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs2334786	chr21:15332366-15332367	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs71330947	chr21:15332386-15332387	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs189354356	chr21:15332466-15332467	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs546755968	chr21:15332476-15332477	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs542544183	chr21:15332478-15332479	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs147078356	chr21:15332481-15332482	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs535132099	chr21:15332527-15332528	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs556009430	chr21:15332573-15332574	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs558612483	chr21:15332590-15332591	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs562329401	chr21:15332602-15332603	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs200408862	chr21:15332611-15332612	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs569414046	chr21:15332680-15332681	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs371708987	chr21:15332682-15332683	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs142778339	chr21:15332726-15332727	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs577858616	chr21:15332752-15332753	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs540326712	chr21:15332818-15332819	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs112017582	chr21:15332822-15332823	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs575357269	chr21:15332831-15332832	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs573965656	chr21:15332854-15332855	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs150318571	chr21:15332871-15332872	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs137942255	chr21:15332882-15332883	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs538049929	chr21:15332910-15332911	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs373538710	chr21:15332920-15332921	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs554699352	chr21:15332927-15332928	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs8127095	chr21:15333028-15333029	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs181203848	chr21:15333029-15333030	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs2822338	chr21:15333031-15333032	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs564262024	chr21:15333041-15333042	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs533206480	chr21:15333064-15333065	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs186501078	chr21:15333074-15333075	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs35062011	chr21:15333087-15333088	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs2822339	chr21:15333091-15333092	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs528999224	chr21:15333099-15333100	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs548672556	chr21:15333101-15333102	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs568844766	chr21:15333132-15333133	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Ovarian cancer	21720365	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Down syndrome	17412756	CNVD
Down syndrome	17576883	CNVD
Acute promyelocytic leukemia	19109227	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Sudden cardiac death	19188705	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Breast cancer	21509527	CNVD
T-cell lymphomas	19863542	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	17387387	CNVD
Renal cell carcinoma	19461508	CNVD
Seminomas	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Metanephric adenoma	20802469	CNVD
Neuroblastoma	18923191	CNVD
Prostate cancer	19156837	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Cancer	20164919	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	20409316	CNVD
Autism	18414403	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
lymphocytic leukemia	21291569	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute myeloid leukemia	21251322	CNVD
abnormal development	18461090	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21364760	CNVD
Melanoma	17363583	CNVD
Breast cancer	22522925	CNVD
Multiple myeloma	17550852	CNVD
Myelofibrosis	22110671	CNVD
Alzheimer''s disease	18923514	CNVD
Alzheimer''s disease	20877625	CNVD
Follicular lymphoma	20505157	CNVD
Alzheimer''s disease	21956041	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Melanoma	18172304	CNVD
Autism	22958593	CNVD
Schizophrenia	22958593	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:15310400-15347400	Weak transcription	Dnd41	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links