Variant report
Variant | nsv966082 |
---|---|
Chromosome Location | chr22:21898928-21918777 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:374)
- CpG islands (count:61)
- Chromatin interactive region (count:4)
- LncRNA region (count:1)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:21910418-21910628 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr22:21910246-21910718 | K562 | blood: | n/a | n/a |
3 | ATF1 | chr22:21910267-21910662 | K562 | blood: | n/a | n/a |
4 | ATF3 | chr22:21910129-21910721 | K562 | blood: | n/a | n/a |
5 | ATF3 | chr22:21910162-21910876 | K562 | blood: | n/a | n/a |
6 | BACH1 | chr22:21910262-21910699 | K562 | blood: | n/a | n/a |
7 | BCL11A | chr22:21904654-21904960 | GM12878 | blood: | n/a | n/a |
8 | BCL3 | chr22:21910210-21910678 | A549 | lung: | n/a | n/a |
9 | BHLHE40 | chr22:21904568-21904918 | HepG2 | liver: | n/a | n/a |
10 | BHLHE40 | chr22:21910291-21910722 | K562 | blood: | n/a | n/a |
11 | CBX3 | chr22:21910069-21911201 | K562 | blood: | n/a | n/a |
12 | CBX3 | chr22:21898573-21899810 | K562 | blood: | n/a | n/a |
13 | CBX3 | chr22:21903838-21905213 | K562 | blood: | n/a | n/a |
14 | CBX3 | chr22:21910176-21910813 | HCT-116 | colon: | n/a | n/a |
15 | CBX3 | chr22:21918345-21919074 | K562 | blood: | n/a | n/a |
16 | CCNT2 | chr22:21910288-21910581 | K562 | blood: | n/a | n/a |
17 | CEBPB | chr22:21910268-21910716 | Hela-S3 | cervix: | n/a | n/a |
18 | CEBPB | chr22:21906821-21907131 | K562 | blood: | n/a | n/a |
19 | CEBPB | chr22:21910305-21910988 | A549 | lung: | n/a | n/a |
20 | CEBPB | chr22:21910187-21910689 | MCF-7 | breast: | n/a | n/a |
21 | CEBPB | chr22:21898692-21899256 | K562 | blood: | n/a | n/a |
22 | CEBPB | chr22:21910315-21910989 | K562 | blood: | n/a | n/a |
23 | CEBPB | chr22:21910794-21910832 | HepG2 | liver: | n/a | n/a |
24 | CEBPB | chr22:21910261-21910925 | IMR90 | lung: | n/a | n/a |
25 | CEBPB | chr22:21910184-21910983 | K562 | blood: | n/a | n/a |
26 | CEBPB | chr22:21906116-21906664 | K562 | blood: | n/a | n/a |
27 | CEBPB | chr22:21906420-21906649 | K562 | blood: | n/a | n/a |
28 | CEBPD | chr22:21898701-21899119 | K562 | blood: | n/a | n/a |
29 | CEBPD | chr22:21906282-21906729 | K562 | blood: | n/a | n/a |
30 | CHD2 | chr22:21910403-21910603 | K562 | blood: | n/a | n/a |
31 | CHD2 | chr22:21910260-21910680 | Hela-S3 | cervix: | n/a | n/a |
32 | CREB1 | chr22:21910230-21910616 | A549 | lung: | n/a | n/a |
33 | CTCF | chr22:21904601-21904959 | A549 | lung: | n/a | n/a |
34 | CTCF | chr22:21904297-21905469 | K562 | blood: | n/a | chr22:21905360-21905369 chr22:21905354-21905372 chr22:21905357-21905367 chr22:21905355-21905371 chr22:21905356-21905369 chr22:21905406-21905419 |
35 | CTCF | chr22:21904641-21904993 | GM10266 | blood: | n/a | n/a |
36 | CTCF | chr22:21910340-21910490 | SAEC | small airway: | n/a | n/a |
37 | CTCF | chr22:21904690-21904965 | Medullo | brain: | n/a | n/a |
38 | CTCF | chr22:21905316-21905421 | GM10248 | blood: | n/a | chr22:21905360-21905369 chr22:21905354-21905372 chr22:21905357-21905367 chr22:21905355-21905371 chr22:21905356-21905369 chr22:21905406-21905419 |
39 | CTCF | chr22:21905120-21905190 | GM10248 | blood: | n/a | n/a |
40 | CTCF | chr22:21904590-21905000 | A549 | lung: | n/a | n/a |
41 | CTCF | chr22:21904632-21904970 | LNCaP | prostate: | n/a | n/a |
42 | CTCF | chr22:21904643-21904925 | GM10248 | blood: | n/a | n/a |
43 | CTCF | chr22:21904536-21905069 | A549 | lung: | n/a | n/a |
44 | CTCF | chr22:21903758-21905563 | K562 | blood: | n/a | chr22:21905360-21905369 chr22:21905354-21905372 chr22:21905357-21905367 chr22:21905355-21905371 chr22:21905356-21905369 chr22:21905406-21905419 |
45 | CTCF | chr22:21905329-21905405 | LNCaP | prostate: | n/a | chr22:21905360-21905369 chr22:21905354-21905372 chr22:21905357-21905367 chr22:21905355-21905371 chr22:21905356-21905369 |
46 | CTCF | chr22:21904673-21904871 | GM13976 | blood: | n/a | n/a |
47 | CTCF | chr22:21904573-21904898 | Lung_OC | lung: | n/a | n/a |
48 | CTCF | chr22:21905334-21905433 | GM10266 | blood: | n/a | chr22:21905360-21905369 chr22:21905354-21905372 chr22:21905357-21905367 chr22:21905355-21905371 chr22:21905356-21905369 chr22:21905406-21905419 |
49 | CTCF | chr22:21903366-21903500 | LNCaP | prostate: | n/a | n/a |
50 | CTCF | chr22:21905104-21905271 | LNCaP | prostate: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21906477-21906527 | AG04449 | skin: | fetal |
2 | chr22:21906477-21906527 | AG09319 | gingival: | n/a |
3 | chr22:21906477-21906527 | Hepatocyte | liver: | n/a |
4 | chr22:21906477-21906527 | IMR90 | lung: | fetal |
5 | chr22:21906477-21906527 | H1-hESC | embryonic stem cell: | embryo |
6 | chr22:21906477-21906527 | HRE | kidney: | n/a |
7 | chr22:21906477-21906527 | HCF | heart: | n/a |
8 | chr22:21906477-21906527 | BJ | skin: | n/a |
9 | chr22:21906477-21906527 | K562 | blood: | n/a |
10 | chr22:21906477-21906527 | HCPEpiC | choroid plexus: | n/a |
11 | chr22:21906477-21906527 | MCF10A-Er-Src | breast: | n/a |
12 | chr22:21906477-21906527 | GM12891 | blood: | n/a |
13 | chr22:21906477-21906527 | Caco-2 | colon: | n/a |
14 | chr22:21906477-21906527 | T-47D | breast: | n/a |
15 | chr22:21906477-21906527 | HUVEC | blood vessel: | n/a |
16 | chr22:21906477-21906527 | HIPEpiC | eye: | n/a |
17 | chr22:21906477-21906527 | HepG2 | liver: | n/a |
18 | chr22:21906477-21906527 | HL-60 | blood: | n/a |
19 | chr22:21906477-21906527 | NH-A | brain: | n/a |
20 | chr22:21906477-21906527 | HCT-116 | colon: | n/a |
21 | chr22:21906477-21906527 | PANC-1 | pancreas: | n/a |
22 | chr22:21906477-21906527 | HNPCEpiC | eye: | n/a |
23 | chr22:21906477-21906527 | NHDF-neo | bronchial: | n/a |
24 | chr22:21906477-21906527 | MCF-7 | breast: | n/a |
25 | chr22:21906477-21906527 | Jurkat | blood: | n/a |
26 | chr22:21906477-21906527 | ECC-1 | luminal epithelium: | n/a |
27 | chr22:21906477-21906527 | HPAEpiC | pulmonary alveolar: | n/a |
28 | chr22:21906477-21906527 | AG04450 | lung: | fetal |
29 | chr22:21906477-21906527 | HEK293 | kidney: | embryo |
30 | chr22:21906477-21906527 | AG09309 | skin: | n/a |
31 | chr22:21906477-21906527 | ProgFib | skin: | n/a |
32 | chr22:21906477-21906527 | AoSMC | blood vessel: | n/a |
33 | chr22:21906477-21906527 | SK-N-SH_RA | brain: | n/a |
34 | chr22:21906477-21906527 | HRPEpiC | eye: | n/a |
35 | chr22:21906477-21906527 | BE2_C | brain: | n/a |
36 | chr22:21906477-21906527 | HCM | heart: | n/a |
37 | chr22:21906477-21906527 | HEEpiC | esophagus: | n/a |
38 | chr22:21906477-21906527 | A549 | lung: | n/a |
39 | chr22:21906477-21906527 | PrEC | prostate: | n/a |
40 | chr22:21906477-21906527 | SK-N-SH | brain: | n/a |
41 | chr22:21906477-21906527 | U87 | brain: | n/a |
42 | chr22:21906477-21906527 | NHBE | bronchial: | n/a |
43 | chr22:21906477-21906527 | NB4 | blood: | n/a |
44 | chr22:21906477-21906527 | GM06990 | blood: | n/a |
45 | chr22:21906477-21906527 | GM12892 | blood: | n/a |
46 | chr22:21906477-21906527 | AG10803 | skin: | n/a |
47 | chr22:21906477-21906527 | NT2-D1 | testis: | n/a |
48 | chr22:21906477-21906527 | ovcar-3 | ovarian: | n/a |
49 | chr22:21906477-21906527 | GM19239 | blood: | n/a |
50 | chr22:21906477-21906527 | SAEC | small airway: | n/a |
(count:4 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21910278..21913507-chr22:21994549..21997856,3 | K562 | blood: | |
2 | chr22:21908736..21910357-chr22:21980107..21982427,2 | K562 | blood: | |
3 | chr22:21910454..21912029-chr22:22004763..22007007,2 | MCF-7 | breast: | |
4 | chr22:21910242..21911830-chr22:21925513..21928236,2 | K562 | blood: |
(count:1 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-RIMBP3C-1 | chr22:21899633-21899933 | NONHSAT083690 |
No data |
No data |
Variant related genes | Relation type |
---|---|
RN7SKP221 | TF binding region |
ENSG00000252143 | TF binding region |
ENSG00000252605 | TF binding region |
RIMBP3C | TF binding region |
UBE2L3 | TF binding region |
RN7SKP221 | CpG island |
ENSG00000252143 | CpG island |
ENSG00000252605 | CpG island |
RIMBP3C | CpG island |
UBE2L3 | CpG island |
ENSG00000128228 | chromatin interactions |
ENSG00000273342 | chromatin interactions |
ENSG00000100023 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs200177142 | chr22:21899053-21899054 | Flanking Active TSS | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
2 | rs554432037 | chr22:21899063-21899064 | Flanking Active TSS | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
3 | rs569469452 | chr22:21899077-21899078 | Flanking Active TSS | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
4 | rs538147666 | chr22:21899234-21899235 | Flanking Active TSS | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
5 | rs9609711 | chr22:21899357-21899358 | Flanking Active TSS | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
6 | rs9609712 | chr22:21899358-21899359 | Flanking Active TSS | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
7 | rs201107952 | chr22:21899537-21899538 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs202079255 | chr22:21899562-21899563 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs555289376 | chr22:21899563-21899564 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
10 | rs200234327 | chr22:21899677-21899678 | Weak transcription | TF binding regionlncRNA | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs568415991 | chr22:21899819-21899820 | Weak transcription | TF binding regionlncRNA | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs533512508 | chr22:21899844-21899845 | Weak transcription | TF binding regionlncRNA | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs553374656 | chr22:21899897-21899898 | Weak transcription | TF binding regionlncRNA | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs576508803 | chr22:21900105-21900106 | Weak transcription | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
15 | rs7926 | chr22:21900192-21900193 | Weak transcription | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
16 | rs556078378 | chr22:21900219-21900220 | Enhancers | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
17 | rs576236666 | chr22:21900246-21900247 | Enhancers | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
18 | rs541665393 | chr22:21900284-21900285 | Enhancers | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
19 | rs9621645 | chr22:21900463-21900464 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
20 | rs484252 | chr22:21900617-21900618 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
21 | rs561924913 | chr22:21900671-21900672 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
22 | rs201052475 | chr22:21900729-21900730 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
23 | rs1610467 | chr22:21901024-21901025 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
24 | rs364215 | chr22:21901168-21901169 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
25 | rs2242314 | chr22:21901347-21901348 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
26 | rs556434496 | chr22:21906250-21906251 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
27 | rs372098837 | chr22:21906282-21906283 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
28 | rs2845511 | chr22:21906437-21906438 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
29 | rs572385159 | chr22:21906444-21906445 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
30 | rs375623486 | chr22:21906462-21906463 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
31 | rs540602541 | chr22:21906466-21906467 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
32 | rs560497127 | chr22:21906475-21906476 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
33 | rs532484714 | chr22:21906505-21906506 | Inactive region | TF binding regionCpG island | 1 gene(s) | Overlapped CNVs | n/a |
34 | rs200855787 | chr22:21906519-21906520 | Inactive region | TF binding regionCpG island | 1 gene(s) | Overlapped CNVs | n/a |
35 | rs552679411 | chr22:21906520-21906521 | Inactive region | TF binding regionCpG island | 1 gene(s) | Overlapped CNVs | n/a |
36 | rs562936043 | chr22:21906533-21906534 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
37 | rs531885672 | chr22:21906539-21906540 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
38 | rs548514869 | chr22:21906778-21906779 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
39 | rs568387514 | chr22:21906816-21906817 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
40 | rs534250205 | chr22:21906833-21906834 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
41 | rs546974300 | chr22:21906999-21907000 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
42 | rs60533570 | chr22:21907581-21907582 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
43 | rs468684 | chr22:21908607-21908608 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs467580 | chr22:21908712-21908713 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
45 | rs556179409 | chr22:21908755-21908756 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
46 | rs368962765 | chr22:21908927-21908928 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
47 | rs467629 | chr22:21908959-21908960 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
48 | rs576067727 | chr22:21909377-21909378 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
49 | rs375040931 | chr22:21909429-21909430 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
50 | rs369494830 | chr22:21909443-21909444 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Lung cancer | 18438408 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21858162 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Prostate cancer | 18632612 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Autism | 19521722 | CNVD |
Digeorge syndrome | 19521722 | CNVD |
Autism | 19955444 | CNVD |
Schizophrenia | 19955444 | CNVD |
Mental retardation | 17124404 | CNVD |
Tourette syndrome | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Schizophrenia | 17160897 | CNVD |
Cancer | 17160897 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
22q11.2 deletion syndrome | 22563040 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Developmental delay | 21147756 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Cognitive impairment | 21505072 | CNVD |
Gastrointestinal stromal cancer | 20877625 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Asthma | 21956041 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Systemic lupus erythematosus | 21956041 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
22q11.23 microdeletion syndrome | 19193630 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Cancer | 20164919 | CNVD |
Breast cancer | 22522925 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Glioma | 20126413 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Acute lymphoblastic leukemia | 18458336 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:21898800-21899000 | Enhancers | K562 | blood |
2 | chr22:21899000-21899400 | Flanking Active TSS | K562 | blood |
3 | chr22:21899400-21899600 | Enhancers | K562 | blood |
4 | chr22:21899600-21900200 | Weak transcription | K562 | blood |
5 | chr22:21900200-21900400 | Enhancers | K562 | blood |
6 | chr22:21908600-21910200 | Weak transcription | Right Atrium | heart |
7 | chr22:21910000-21910200 | Enhancers | Placenta | Placenta |
8 | chr22:21910000-21910200 | Enhancers | A549 | lung |
9 | chr22:21910000-21910200 | Enhancers | K562 | blood |
10 | chr22:21910000-21910400 | Enhancers | Stomach Mucosa | stomach |
11 | chr22:21910000-21910600 | Enhancers | HepG2 | liver |
12 | chr22:21910000-21910800 | Enhancers | NHEK | skin |
13 | chr22:21910000-21911000 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
14 | chr22:21910000-21911000 | Enhancers | NH-A | brain |
15 | chr22:21910000-21911200 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
16 | chr22:21910000-21911200 | Enhancers | Hela-S3 | cervix |
17 | chr22:21910200-21910400 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
18 | chr22:21910200-21910400 | Enhancers | Fetal Muscle Leg | muscle |
19 | chr22:21910200-21910400 | Flanking Active TSS | K562 | blood |
20 | chr22:21910200-21910600 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
21 | chr22:21910200-21910600 | Bivalent Enhancer | Placenta | Placenta |
22 | chr22:21910200-21910600 | ZNF genes & repeats | Right Atrium | heart |
23 | chr22:21910200-21910600 | Flanking Active TSS | A549 | lung |
24 | chr22:21910200-21910800 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
25 | chr22:21910200-21910800 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
26 | chr22:21910200-21910800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
27 | chr22:21910200-21910800 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
28 | chr22:21910200-21910800 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
29 | chr22:21910200-21910800 | Enhancers | HMEC | breast |
30 | chr22:21910200-21910800 | Enhancers | HSMM | muscle |
31 | chr22:21910200-21910800 | Enhancers | NHDF-Ad | bronchial |
32 | chr22:21910200-21911000 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
33 | chr22:21910200-21911000 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
34 | chr22:21910200-21911000 | Enhancers | Muscle Satellite Cultured Cells | -- |
35 | chr22:21910200-21911000 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
36 | chr22:21910200-21911000 | Enhancers | Osteobl | bone |
37 | chr22:21910400-21910600 | Bivalent Enhancer | Fetal Muscle Leg | muscle |
38 | chr22:21910400-21910800 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
39 | chr22:21910400-21910800 | Bivalent Enhancer | K562 | blood |
40 | chr22:21910600-21911200 | Enhancers | Placenta | Placenta |
41 | chr22:21910600-21921800 | Weak transcription | Right Atrium | heart |
42 | chr22:21910800-21914000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
43 | chr22:21911000-21914000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
44 | chr22:21914000-21914400 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
45 | chr22:21914000-21914400 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
46 | chr22:21914000-21914400 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
47 | chr22:21914400-21921600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
48 | chr22:21918400-21921400 | Enhancers | K562 | blood |
49 | chr22:21918600-21919000 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |