Variant report

Variant	nsv967029
Chromosome Location	chr3:76028463-76047045
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 127 )
Associated
traits (count: 79 )

Variant overlapped rSNPs/rCNVs (count:127 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs186331678	chr3:76032033-76032034	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs565737623	chr3:76032063-76032064	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs534394660	chr3:76032065-76032066	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs555969300	chr3:76032114-76032115	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs574290285	chr3:76032126-76032127	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs191988756	chr3:76032134-76032135	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs556813793	chr3:76032137-76032138	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs72890330	chr3:76032138-76032139	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs544961578	chr3:76032148-76032149	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs560216859	chr3:76032184-76032185	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs572181626	chr3:76032238-76032239	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs181674357	chr3:76032278-76032279	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs560962508	chr3:76032310-76032311	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs531514474	chr3:76032316-76032317	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs62267179	chr3:76032322-76032323	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs76574127	chr3:76032358-76032359	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs531621426	chr3:76032473-76032474	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs186835897	chr3:76032474-76032475	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs138165677	chr3:76032482-76032483	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs143829371	chr3:76032484-76032485	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs147012923	chr3:76032518-76032519	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs567692621	chr3:76032543-76032544	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs548289905	chr3:76032549-76032550	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs138163234	chr3:76032576-76032577	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs369273469	chr3:76032709-76032710	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs190965852	chr3:76032784-76032785	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs556590274	chr3:76032824-76032825	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs372836542	chr3:76032829-76032830	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs578162810	chr3:76032861-76032862	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs575017361	chr3:76032869-76032870	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs538672523	chr3:76032870-76032871	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs553718335	chr3:76032871-76032872	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs549746863	chr3:76032886-76032887	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs572095938	chr3:76032978-76032979	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs542743755	chr3:76033015-76033016	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs561428435	chr3:76033021-76033022	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs77406173	chr3:76033043-76033044	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs571951932	chr3:76033044-76033045	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs553413366	chr3:76033095-76033096	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs543561399	chr3:76033096-76033097	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs565033848	chr3:76033128-76033129	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs532418235	chr3:76033155-76033156	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs143652816	chr3:76033163-76033164	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs61312087	chr3:76033174-76033175	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs548020933	chr3:76033207-76033208	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs34095968	chr3:76033235-76033236	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs183063280	chr3:76033304-76033305	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs144001731	chr3:76033350-76033351	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs148661034	chr3:76033353-76033354	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs550322751	chr3:76033363-76033364	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:79)

Disease	PMID	Source
Acute myeloid leukemia	20729466	CNVD
Glioblastoma multiforme	21080181	CNVD
Melanoma	18172304	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	21251322	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Autism	22102821	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Prostate cancer	18632612	CNVD
Metanephric adenoma	20802469	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21509527	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	21399695	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Colorectal cancer	16272173	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Soft tissue tumor	16732325	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:76032000-76033400	Enhancers	Fetal Brain Male	brain
2	chr3:76036400-76036800	Active TSS	Adipose Nuclei	Adipose
3	chr3:76041200-76042000	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
4	chr3:76041800-76042200	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
5	chr3:76043400-76044200	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell

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