Variant report

Variant	nsv967308
Chromosome Location	chr7:61070390-61072200
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 65 )

Variant overlapped rSNPs/rCNVs (count:50 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs200745980	chr7:61070810-61070811	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs551458294	chr7:61070822-61070823	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs533876031	chr7:61070826-61070827	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs558732243	chr7:61070827-61070828	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs111604878	chr7:61070852-61070853	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs538898836	chr7:61070876-61070877	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs557611529	chr7:61070882-61070883	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs199986014	chr7:61070886-61070887	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs113678138	chr7:61070892-61070893	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs575871234	chr7:61070900-61070901	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs201857835	chr7:61070904-61070905	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs200181035	chr7:61070905-61070906	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs185451160	chr7:61070911-61070912	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs554556040	chr7:61070926-61070927	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs572957200	chr7:61070935-61070936	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs190206560	chr7:61070943-61070944	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs565277985	chr7:61070956-61070957	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs199918136	chr7:61070962-61070963	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs544095396	chr7:61070999-61071000	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs571213359	chr7:61071002-61071003	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs112848429	chr7:61071004-61071005	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs201043535	chr7:61071010-61071011	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs529951568	chr7:61071011-61071012	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs548161008	chr7:61071024-61071025	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs182758824	chr7:61071034-61071035	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs9314238	chr7:61071035-61071036	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs375578894	chr7:61071036-61071037	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs552286841	chr7:61071038-61071039	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs151320799	chr7:61071039-61071040	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs539196269	chr7:61071046-61071047	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs186054091	chr7:61071050-61071051	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs550910013	chr7:61071053-61071054	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs569497031	chr7:61071060-61071061	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs536554454	chr7:61071079-61071080	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs59921127	chr7:61071084-61071085	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs9314239	chr7:61071095-61071096	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs533957802	chr7:61071096-61071097	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs201066521	chr7:61071101-61071102	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs9314240	chr7:61071103-61071104	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs138871160	chr7:61071105-61071106	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs75115259	chr7:61071132-61071133	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs577280221	chr7:61071145-61071146	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs536536973	chr7:61071162-61071163	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs73351394	chr7:61071167-61071168	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs192109129	chr7:61071171-61071172	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs544351841	chr7:61071172-61071173	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs375980713	chr7:61071175-61071176	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs562545473	chr7:61071187-61071188	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs9314241	chr7:61071188-61071189	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs542135972	chr7:61071193-61071194	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:65)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Follicular lymphoma	20505157	CNVD
Biliary cancer	19435499	CNVD
Williams-beuren syndrome	22470819	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Hepatocellular carcinoma	16750200	CNVD
Non-small cell lung cancer	21829676	CNVD
Gastric cancer	24379144	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Hodgkin''s lymphoma	18641027	CNVD
small cell lung cancer	20016488	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Glioblastoma	21080181	CNVD
Autism	18414403	CNVD
Colorectal cancer	16272173	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	21364760	CNVD
Cancer	20164919	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:61070800-61071200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell

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