Variant report

Variant	nsv967435
Chromosome Location	chr7:100406273-100422961
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:228)
CpG islands
(count:919)
Chromatin interactive
region (count:32)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:228 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:100420508-100420589	HepG2	liver:	n/a	n/a
2	CEBPB	chr7:100411685-100412100	HepG2	liver:	n/a	n/a
3	CEBPB	chr7:100411501-100412090	HepG2	liver:	n/a	n/a
4	CEBPB	chr7:100411675-100412095	Hela-S3	cervix:	n/a	n/a
5	CEBPB	chr7:100411600-100412138	HepG2	liver:	n/a	n/a
6	CEBPB	chr7:100411677-100412051	A549	lung:	n/a	n/a
7	CEBPB	chr7:100411879-100412002	K562	blood:	n/a	n/a
8	CEBPB	chr7:100414306-100414467	A549	lung:	n/a	n/a
9	CEBPB	chr7:100411709-100412096	IMR90	lung:	n/a	n/a
10	CEBPB	chr7:100411536-100412272	MCF-7	breast:	n/a	n/a
11	CEBPB	chr7:100411559-100412200	A549	lung:	n/a	n/a
12	CEBPB	chr7:100411755-100412093	A549	lung:	n/a	n/a
13	CEBPB	chr7:100411555-100412192	MCF-7	breast:	n/a	n/a
14	CEBPB	chr7:100411715-100412050	HepG2	liver:	n/a	n/a
15	CEBPB	chr7:100414210-100414512	HepG2	liver:	n/a	n/a
16	CEBPD	chr7:100411754-100412102	HepG2	liver:	n/a	n/a
17	CEBPD	chr7:100411791-100412057	HepG2	liver:	n/a	n/a
18	CTCF	chr7:100419340-100419362	GM13976	blood:	n/a	n/a
19	CTCF	chr7:100422524-100425952	SK-N-SH	brain:	n/a	chr7:100425569-100425590 chr7:100424947-100424956 chr7:100424800-100424813 chr7:100425592-100425613 chr7:100425599-100425612 chr7:100425602-100425610 chr7:100424039-100424052 chr7:100425597-100425615
20	CTCF	chr7:100420360-100420510	A549	lung:	n/a	n/a
21	CTCF	chr7:100412391-100412421	Kidney_OC	kidney:	n/a	n/a
22	CTCF	chr7:100418600-100418750	GM12868	blood:	n/a	n/a
23	CTCF	chr7:100420860-100421010	HepG2	liver:	n/a	n/a
24	CTCF	chr7:100411620-100411770	HepG2	liver:	n/a	n/a
25	CTCF	chr7:100411213-100411284	GM20000	blood:	n/a	n/a
26	CTCF	chr7:100420804-100420960	HepG2	liver:	n/a	n/a
27	CTCF	chr7:100420860-100421010	HBMEC	blood vessel:	n/a	n/a
28	CTCF	chr7:100420879-100420983	HepG2	liver:	n/a	n/a
29	CTCF	chr7:100420820-100420970	HUVEC	blood vessel:	n/a	n/a
30	CTCF	chr7:100411540-100411690	HepG2	liver:	n/a	n/a
31	CTCF	chr7:100411740-100411890	NB4	blood:	n/a	chr7:100411820-100411829 chr7:100411820-100411833
32	CTCF	chr7:100411680-100411830	Caco-2	colon:	n/a	chr7:100411820-100411829
33	CTCF	chr7:100420880-100421030	HRPEpiC	eye:	n/a	n/a
34	CTCF	chr7:100420740-100420890	HAc	cerebellar:	n/a	n/a
35	CTCF	chr7:100419498-100419514	Kidney_OC	kidney:	n/a	n/a
36	CTCF	chr7:100409702-100409738	GM20000	blood:	n/a	n/a
37	EP300	chr7:100411572-100412067	HepG2	liver:	n/a	n/a
38	EP300	chr7:100411518-100412074	HepG2	liver:	n/a	n/a
39	EP300	chr7:100414097-100414553	HepG2	liver:	n/a	n/a
40	ETS1	chr7:100422958-100423249	K562	blood:	n/a	n/a
41	FOS	chr7:100411821-100411900	MCF10A-Er-Src	breast:	n/a	n/a
42	FOXA1	chr7:100414139-100414501	HepG2	liver:	n/a	n/a
43	FOXA1	chr7:100411687-100412152	HepG2	liver:	n/a	n/a
44	FOXA1	chr7:100411652-100412054	HepG2	liver:	n/a	n/a
45	FOXA2	chr7:100411666-100412050	HepG2	liver:	n/a	n/a
46	FOXA2	chr7:100414166-100414430	HepG2	liver:	n/a	n/a
47	HDAC2	chr7:100411570-100412114	HepG2	liver:	n/a	n/a
48	HMGN3	chr7:100410456-100410530	K562	blood:	n/a	n/a
49	HMGN3	chr7:100414846-100415015	K562	blood:	n/a	n/a
50	HNF4A	chr7:100411520-100411989	HepG2	liver:	n/a	chr7:100411717-100411730

(count:919 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:100421502-100421552	MCF-7	breast:	n/a
2	chr7:100421510-100421560	HUVEC	blood vessel:	n/a
3	chr7:100410682-100410732	IMR90	lung:	fetal
4	chr7:100417404-100417454	AG04450	lung:	fetal
5	chr7:100421502-100421552	MCF-7	breast:	n/a
6	chr7:100421510-100421560	HUVEC	blood vessel:	n/a
7	chr7:100410682-100410732	IMR90	lung:	fetal
8	chr7:100417404-100417454	AG04450	lung:	fetal
9	chr7:100410497-100410547	AG10803	skin:	n/a
10	chr7:100417404-100417454	MCF-7	breast:	n/a
11	chr7:100410497-100410547	Hepatocyte	liver:	n/a
12	chr7:100417404-100417454	ovcar-3	ovarian:	n/a
13	chr7:100420040-100420090	SKMC	muscle:	n/a
14	chr7:100420212-100420262	SK-N-SH_RA	brain:	n/a
15	chr7:100421296-100421346	HL-60	blood:	n/a
16	chr7:100418770-100418820	HRPEpiC	eye:	n/a
17	chr7:100421502-100421552	H1-hESC	embryonic stem cell:	embryo
18	chr7:100420040-100420090	HCPEpiC	choroid plexus:	n/a
19	chr7:100421372-100421422	HUVEC	blood vessel:	n/a
20	chr7:100418770-100418820	SAEC	small airway:	n/a
21	chr7:100420109-100420159	ProgFib	skin:	n/a
22	chr7:100410682-100410732	HRE	kidney:	n/a
23	chr7:100421296-100421346	HMEC	breast:	n/a
24	chr7:100421317-100421367	IMR90	lung:	fetal
25	chr7:100420040-100420090	SK-N-MC	brain:	n/a
26	chr7:100421296-100421346	ovcar-3	ovarian:	n/a
27	chr7:100421372-100421422	Caco-2	colon:	n/a
28	chr7:100414918-100414968	Jurkat	blood:	n/a
29	chr7:100421317-100421367	HAEpiC	amniotic membrane:	n/a
30	chr7:100410497-100410547	SK-N-MC	brain:	n/a
31	chr7:100410630-100410680	HNPCEpiC	eye:	n/a
32	chr7:100410630-100410680	SAEC	small airway:	n/a
33	chr7:100420212-100420262	HCPEpiC	choroid plexus:	n/a
34	chr7:100420109-100420159	ECC-1	luminal epithelium:	n/a
35	chr7:100410682-100410732	U87	brain:	n/a
36	chr7:100420212-100420262	AG10803	skin:	n/a
37	chr7:100414918-100414968	IMR90	lung:	fetal
38	chr7:100414918-100414968	GM12891	blood:	n/a
39	chr7:100410682-100410732	BE2_C	brain:	n/a
40	chr7:100410630-100410680	HMEC	breast:	n/a
41	chr7:100421510-100421560	HRE	kidney:	n/a
42	chr7:100410682-100410732	PrEC	prostate:	n/a
43	chr7:100410497-100410547	LNCaP	prostate:	n/a
44	chr7:100421296-100421346	PFSK-1	brain:	n/a
45	chr7:100421317-100421367	CMK	blood:	n/a
46	chr7:100421317-100421367	H1-hESC	embryonic stem cell:	embryo
47	chr7:100421372-100421422	LNCaP	prostate:	n/a
48	chr7:100418770-100418820	HEEpiC	esophagus:	n/a
49	chr7:100421317-100421367	BJ	skin:	n/a
50	chr7:100420212-100420262	HIPEpiC	eye:	n/a

(count:32 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:100417681..100419795-chr7:100419841..100422424,3	MCF-7	breast:
2	chr7:100401192..100404144-chr7:100407945..100410039,3	K562	blood:
3	chr7:100418397..100419909-chr7:100486584..100488563,2	MCF-7	breast:
4	chr7:100410343..100413835-chr7:100422249..100426210,7	MCF-7	breast:
5	chr7:100404960..100406737-chr7:100409300..100411375,2	MCF-7	breast:
6	chr7:100208147..100211165-chr7:100422696..100426389,3	MCF-7	breast:
7	chr7:100411612..100416367-chr7:100416758..100421985,7	MCF-7	breast:
8	chr7:100289891..100291847-chr7:100416190..100417802,2	K562	blood:
9	chr7:100416260..100418305-chr7:100463374..100465090,2	MCF-7	breast:
10	chr7:100026028..100027729-chr7:100422435..100425262,2	MCF-7	breast:
11	chr7:100404894..100407220-chr7:100484174..100486005,2	MCF-7	breast:
12	chr7:100422126..100425537-chr7:100471170..100475559,4	MCF-7	breast:
13	chr7:100414358..100416032-chr7:100466153..100468789,2	K562	blood:
14	chr7:100422826..100425783-chr7:100447402..100452140,5	K562	blood:
15	chr7:100410860..100413400-chr7:100471850..100474655,4	MCF-7	breast:
16	chr7:100398769..100401112-chr7:100407441..100409562,2	MCF-7	breast:
17	chr7:100404674..100407253-chr7:100412910..100415943,3	MCF-7	breast:
18	chr7:100404960..100406737-chr7:100409300..100411375,2	MCF-7	breast:
19	chr7:100415072..100417547-chr7:100433376..100435074,2	K562	blood:
20	chr7:100271082..100273257-chr7:100420058..100422444,2	MCF-7	breast:
21	chr7:100410343..100413835-chr7:100422249..100426210,7	MCF-7	breast:
22	chr7:100180828..100183630-chr7:100412153..100413841,2	MCF-7	breast:
23	chr7:100414804..100417415-chr7:100464591..100466157,2	MCF-7	breast:
24	chr7:100419521..100422114-chr7:100465027..100466643,2	MCF-7	breast:
25	chr7:100405107..100406724-chr7:100407587..100410584,2	K562	blood:
26	chr7:100422507..100426422-chr7:100448675..100454510,8	MCF-7	breast:
27	chr7:100400738..100403633-chr7:100407631..100410567,3	MCF-7	breast:
28	chr7:100421802..100424702-chr7:100482689..100484467,2	MCF-7	breast:
29	chr7:100403718..100405403-chr7:100421041..100423553,2	MCF-7	breast:
30	chr7:100422507..100425208-chr7:100700393..100702455,2	MCF-7	breast:
31	chr7:100407139..100410439-chr7:100411082..100413688,3	K562	blood:
32	chr7:100411612..100416367-chr7:100416758..100421985,7	MCF-7	breast:

No data

Variant related genes	Relation type
SLC12A9	TF binding region
RN7SL750P	TF binding region
EPHB4	TF binding region
SLC12A9	CpG island
RN7SL750P	CpG island
EPHB4	CpG island
ENSG00000222636	chromatin interactions
ENSG00000087087	chromatin interactions
ENSG00000196411	chromatin interactions
ENSG00000263672	chromatin interactions
ENSG00000078487	chromatin interactions
ENSG00000077454	chromatin interactions
ENSG00000146834	chromatin interactions
ENSG00000176125	chromatin interactions
ENSG00000236305	chromatin interactions
ENSG00000106336	chromatin interactions
ENSG00000172354	chromatin interactions
ENSG00000106330	chromatin interactions
ENSG00000146828	chromatin interactions
ENSG00000087077	chromatin interactions

Extended variants
information (count: 858 )
Associated
traits (count: 93 )

Variant overlapped rSNPs/rCNVs (count:858 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs148146568	chr7:100406291-100406292	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs564452150	chr7:100406317-100406318	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs553420757	chr7:100406345-100406346	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs547190934	chr7:100406359-100406360	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs117154822	chr7:100406360-100406361	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs529421793	chr7:100406374-100406375	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs375721874	chr7:100406387-100406388	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs569319359	chr7:100406410-100406411	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs539844504	chr7:100406419-100406420	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs558850347	chr7:100406469-100406470	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs80161092	chr7:100406478-100406479	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs534497555	chr7:100406493-100406494	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs185500192	chr7:100406511-100406512	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs141186297	chr7:100406522-100406523	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs370115679	chr7:100406544-100406545	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs368630629	chr7:100406552-100406553	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs541957698	chr7:100406644-100406645	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs373025558	chr7:100406689-100406690	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs190367063	chr7:100406694-100406695	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs574856041	chr7:100406757-100406758	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs545413616	chr7:100406765-100406766	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs564408703	chr7:100406829-100406830	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs528784850	chr7:100406896-100406897	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs58838040	chr7:100406901-100406902	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs314354	chr7:100406915-100406916	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs537158350	chr7:100406919-100406920	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs555235545	chr7:100406948-100406949	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs529365201	chr7:100406998-100406999	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs551005490	chr7:100407059-100407060	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs142339621	chr7:100407068-100407069	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs114542821	chr7:100407139-100407140	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs201039605	chr7:100407146-100407147	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs533330249	chr7:100407147-100407148	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs367821656	chr7:100407157-100407158	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs551828728	chr7:100407159-100407160	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs192794016	chr7:100407168-100407169	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs76987248	chr7:100407232-100407233	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs570744841	chr7:100407247-100407248	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs534960153	chr7:100407278-100407279	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs552890551	chr7:100407324-100407325	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs568202509	chr7:100407325-100407326	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs370826832	chr7:100407336-100407337	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs556608279	chr7:100407348-100407349	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs575019772	chr7:100407351-100407352	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs545369775	chr7:100407357-100407358	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs372782658	chr7:100407370-100407371	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs568240969	chr7:100407404-100407405	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs74827587	chr7:100407416-100407417	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs573447280	chr7:100407453-100407454	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs540967887	chr7:100407531-100407532	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:93)

Disease	PMID	Source
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Non-small cell lung cancer	21829676	CNVD
Gastric cancer	24379144	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Prostate cancer	16461572	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Malignant melanoma	17260012	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21785460	CNVD
Chronic myeloid leukemia	21384125	CNVD
Bladder cancer	21909424	CNVD
Biliary cancer	19435499	CNVD
Myelofibrosis	22110671	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	16608533	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Liver carcinoma	19366792	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Adenocarcinoma	19607727	CNVD
Multiple myeloma	16461302	CNVD
Breast cancer	21858162	CNVD
Emphysema	19352772	CNVD
Effusion lymphoma	18079361	CNVD
Medulloblastoma	17653508	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Autism	19401682	CNVD
Neuroticism	17667963	CNVD
Breast cancer	21509527	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Prostate cancer	18632612	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Breast cancer	20409316	CNVD
aortic dissecting aneurysms	22263138	CNVD

Chromatin state (count:537 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:100399600-100422200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr7:100399600-100422200	Strong transcription	iPS-15b Cell Line	embryonic stem cell
3	chr7:100399800-100422400	Strong transcription	H9 Cell Line	embryonic stem cell
4	chr7:100399800-100422400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr7:100400000-100422200	Strong transcription	HUES64 Cell Line	embryonic stem cell
6	chr7:100400400-100422200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
7	chr7:100400600-100409000	Genic enhancers	Placenta	Placenta
8	chr7:100401600-100408200	Weak transcription	Small Intestine	intestine
9	chr7:100401600-100410800	Weak transcription	Osteobl	bone
10	chr7:100401600-100420800	Weak transcription	Brain Angular Gyrus	brain
11	chr7:100401600-100421800	Strong transcription	iPS-18 Cell Line	embryonic stem cell
12	chr7:100401600-100421800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr7:100401600-100422000	Strong transcription	H1 Cell Line	embryonic stem cell
14	chr7:100401600-100422000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr7:100401600-100422600	Strong transcription	HUES48 Cell Line	embryonic stem cell
16	chr7:100401600-100423200	Weak transcription	Brain Anterior Caudate	brain
17	chr7:100401800-100406400	Strong transcription	HSMM	muscle
18	chr7:100401800-100407200	Strong transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr7:100401800-100407400	Strong transcription	NHLF	lung
20	chr7:100401800-100410600	Weak transcription	Hela-S3	cervix
21	chr7:100401800-100411000	Strong transcription	Primary neutrophils fromperipheralblood	blood
22	chr7:100401800-100411200	Weak transcription	Brain Hippocampus Middle	brain
23	chr7:100401800-100411400	Weak transcription	Primary B cells from cord blood	blood
24	chr7:100401800-100412200	Weak transcription	Primary hematopoietic stem cells	blood
25	chr7:100401800-100412200	Strong transcription	HMEC	breast
26	chr7:100401800-100413400	Weak transcription	Brain Substantia Nigra	brain
27	chr7:100401800-100415800	Weak transcription	Skeletal Muscle Female	skeletal muscle
28	chr7:100401800-100416600	Weak transcription	Stomach Mucosa	stomach
29	chr7:100401800-100419600	Weak transcription	Right Atrium	heart
30	chr7:100401800-100421400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
31	chr7:100401800-100421400	Strong transcription	Fetal Stomach	stomach
32	chr7:100401800-100422200	Weak transcription	Brain Cingulate Gyrus	brain
33	chr7:100401800-100422200	Weak transcription	Fetal Heart	heart
34	chr7:100401800-100422400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr7:100401800-100422400	Strong transcription	HUES6 Cell Line	embryonic stem cell
36	chr7:100401800-100422400	Strong transcription	Fetal Intestine Large	intestine
37	chr7:100401800-100422600	Weak transcription	Fetal Brain Male	brain
38	chr7:100401800-100422600	Strong transcription	Fetal Intestine Small	intestine
39	chr7:100401800-100423000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr7:100402000-100411600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr7:100402000-100421200	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
42	chr7:100402000-100421800	Strong transcription	Fetal Muscle Trunk	muscle
43	chr7:100402000-100421800	Strong transcription	NHEK	skin
44	chr7:100402000-100422000	Strong transcription	Fetal Muscle Leg	muscle
45	chr7:100402000-100422600	Strong transcription	Cortex derived primary cultured neurospheres	brain
46	chr7:100402000-100422600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr7:100402200-100406800	Strong transcription	ES-I3 Cell Line	embryonic stem cell
48	chr7:100402200-100408200	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
49	chr7:100402200-100413400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr7:100402200-100418400	Strong transcription	Duodenum Mucosa	Duodenum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links