Variant report

Variant	nsv967624
Chromosome Location	chr8:104096626-104097563
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:104082725..104084383-chr8:104095090..104097237,2	MCF-7	breast:

Extended variants
information (count: 28 )
Associated
traits (count: 111 )

Variant overlapped rSNPs/rCNVs (count:28 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs111924288	chr8:104096647-104096648	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs531731110	chr8:104096674-104096675	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs75308243	chr8:104096697-104096698	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs10110939	chr8:104096710-104096711	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs149603154	chr8:104096734-104096735	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs562758121	chr8:104096743-104096744	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs77257919	chr8:104096753-104096754	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs35399053	chr8:104096773-104096774	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs536094870	chr8:104096866-104096867	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs530263353	chr8:104096890-104096891	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs192989901	chr8:104096973-104096974	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs560258531	chr8:104096977-104096978	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs564358314	chr8:104097000-104097001	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs58472074	chr8:104097002-104097003	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs77883798	chr8:104097033-104097034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs144343744	chr8:104097056-104097057	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs529764153	chr8:104097125-104097126	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs183275431	chr8:104097165-104097166	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs375902689	chr8:104097176-104097177	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs550077467	chr8:104097181-104097182	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs77312233	chr8:104097252-104097253	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs569059895	chr8:104097291-104097292	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs372209282	chr8:104097309-104097310	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs2047375	chr8:104097396-104097397	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs554702883	chr8:104097502-104097503	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs566487063	chr8:104097511-104097512	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs546789097	chr8:104097514-104097515	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs188100871	chr8:104097553-104097554	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:111)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Cancer	21949371	CNVD
Non-small cell lung cancer	21829676	CNVD
Multiple myeloma	16461302	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute myeloid leukemia	21358987	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
small cell lung cancer	20016488	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Bladder cancer	19088036	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Colorectal cancer	16774939	CNVD
Autosomal-dominant progressive external ophthalmoplegia	19664747	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	17260012	CNVD
Sezary syndrome	18413736	CNVD
Urothelial cell carcinoma	18451213	CNVD
Colorectal cancer	21645411	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Ovarian cancer	20844748	CNVD
Colorectal cancer	16912164	CNVD
Breast cancer	20409316	CNVD
Congenital anomalies of the kidney and urinary tract	20467480	CNVD
Breast cancer	21611746	CNVD
Oral squamous cell carcinoma	21853135	CNVD
Bladder cancer	21909424	CNVD
Developmental delay	21147756	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:104092400-104121600	Weak transcription	Right Atrium	heart

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