Variant report

Variant nsv968189
Chromosome Location chr5:68829015-68919282
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:373 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:68815800-68831000 Weak transcription HepG2 liver
2 chr5:68821800-68830800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr5:68822400-68829400 Weak transcription Fetal Stomach stomach
4 chr5:68823600-68829200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr5:68824000-68830600 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr5:68824000-68855400 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr5:68824200-68829600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr5:68824400-68832400 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr5:68826600-68830600 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr5:68827200-68829200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr5:68827200-68831000 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr5:68827600-68829200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr5:68827600-68829600 Strong transcription Fetal Intestine Small intestine
14 chr5:68827600-68830200 Weak transcription GM12878-XiMat blood
15 chr5:68827600-68830800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr5:68827800-68830200 Weak transcription Brain Anterior Caudate brain
17 chr5:68828000-68829600 Strong transcription Liver Liver
18 chr5:68828200-68829200 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr5:68828200-68830800 Weak transcription Gastric stomach
20 chr5:68828200-68840800 Weak transcription Pancreas Pancrea
21 chr5:68828800-68829800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr5:68829000-68829400 Enhancers Fetal Intestine Large intestine
23 chr5:68829000-68829800 Enhancers Stomach Mucosa stomach
24 chr5:68829200-68829400 ZNF genes & repeats H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr5:68829200-68829400 Enhancers Cortex derived primary cultured neurospheres brain
26 chr5:68829200-68829400 Enhancers Rectal Mucosa Donor 31 rectum
27 chr5:68829200-68829400 Enhancers Sigmoid Colon Sigmoid Colon
28 chr5:68829400-68829600 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr5:68829600-68831200 Weak transcription Liver Liver
30 chr5:68829600-68855400 Weak transcription Fetal Intestine Small intestine
31 chr5:68829800-68832000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr5:68840800-68841000 Enhancers Pancreas Pancrea
33 chr5:68840800-68841000 Enhancers HepG2 liver
34 chr5:68841000-68841200 Weak transcription Pancreas Pancrea
35 chr5:68841000-68855200 Weak transcription HepG2 liver
36 chr5:68844400-68855400 Weak transcription Fetal Intestine Large intestine
37 chr5:68845800-68855600 Weak transcription H9 Cell Line embryonic stem cell
38 chr5:68855000-68855200 Enhancers Dnd41 blood
39 chr5:68855000-68855600 Enhancers Primary T cells fromperipheralblood blood
40 chr5:68855200-68855400 Enhancers Primary T helper cells PMA-I stimulated --
41 chr5:68855200-68855400 Enhancers Adipose Nuclei Adipose
42 chr5:68855200-68855400 Enhancers Liver Liver
43 chr5:68855200-68855400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
44 chr5:68855200-68855400 Enhancers HepG2 liver
45 chr5:68855200-68855400 Enhancers HUVEC blood vessel
46 chr5:68855200-68855600 Enhancers Right Atrium heart
47 chr5:68855200-68855600 Flanking Active TSS Dnd41 blood
48 chr5:68855200-68855800 Enhancers Fetal Brain Male brain
49 chr5:68855200-68856800 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
50 chr5:68855200-68857000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links