Variant report

Variant	nsv968599
Chromosome Location	chr9:21166047-21239960
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BATF	chr9:21183391-21183669	GM12878	blood:	n/a	n/a
2	BATF	chr9:21195452-21195727	GM12878	blood:	n/a	n/a
3	BATF	chr9:21214009-21214242	GM12878	blood:	n/a	n/a
4	BATF	chr9:21195481-21195714	GM12878	blood:	n/a	n/a
5	BATF	chr9:21236050-21236328	GM12878	blood:	n/a	n/a
6	BATF	chr9:21183393-21183622	GM12878	blood:	n/a	n/a
7	BATF	chr9:21213980-21214258	GM12878	blood:	n/a	n/a
8	BCL11A	chr9:21236105-21236278	GM12878	blood:	n/a	chr9:21236181-21236190
9	BCL11A	chr9:21195471-21195683	GM12878	blood:	n/a	chr9:21195583-21195592
10	BCL11A	chr9:21236007-21236322	GM12878	blood:	n/a	chr9:21236181-21236190
11	BCL11A	chr9:21213900-21214291	GM12878	blood:	n/a	chr9:21214111-21214120
12	BCL11A	chr9:21183431-21183637	GM12878	blood:	n/a	chr9:21183522-21183531
13	BCL11A	chr9:21195389-21195749	GM12878	blood:	n/a	chr9:21195583-21195592
14	BCL11A	chr9:21213999-21214266	GM12878	blood:	n/a	chr9:21214111-21214120
15	BHLHE40	chr9:21195256-21195293	GM12878	blood:	n/a	n/a
16	BHLHE40	chr9:21235842-21236001	GM12878	blood:	n/a	n/a
17	BRCA1	chr9:21235836-21236005	Hela-S3	cervix:	n/a	n/a
18	CEBPB	chr9:21175996-21176312	HepG2	liver:	n/a	chr9:21176156-21176169 chr9:21176156-21176169 chr9:21176158-21176167 chr9:21176233-21176244 chr9:21176231-21176244 chr9:21176156-21176167 chr9:21176157-21176168
19	CEBPB	chr9:21213807-21213921	IMR90	lung:	n/a	n/a
20	CEBPB	chr9:21172249-21172496	A549	lung:	n/a	chr9:21172346-21172357
21	CEBPB	chr9:21235830-21236091	Hela-S3	cervix:	n/a	n/a
22	CEBPB	chr9:21175999-21176288	IMR90	lung:	n/a	chr9:21176156-21176169 chr9:21176156-21176169 chr9:21176158-21176167 chr9:21176233-21176244 chr9:21176231-21176244 chr9:21176156-21176167 chr9:21176157-21176168
23	CEBPB	chr9:21176025-21176293	H1-hESC	embryonic stem cell:	n/a	chr9:21176156-21176169 chr9:21176156-21176169 chr9:21176158-21176167 chr9:21176233-21176244 chr9:21176231-21176244 chr9:21176156-21176167 chr9:21176157-21176168
24	CEBPB	chr9:21176035-21176261	A549	lung:	n/a	chr9:21176156-21176169 chr9:21176156-21176169 chr9:21176158-21176167 chr9:21176233-21176244 chr9:21176231-21176244 chr9:21176156-21176167 chr9:21176157-21176168
25	CEBPB	chr9:21172238-21172445	HepG2	liver:	n/a	chr9:21172346-21172357
26	CEBPB	chr9:21183206-21183372	A549	lung:	n/a	n/a
27	CTCF	chr9:21195340-21195490	HFF-Myc	foreskin:	n/a	n/a
28	CTCF	chr9:21235776-21236022	GM19238	blood:	n/a	chr9:21235917-21235938
29	CTCF	chr9:21195260-21195410	HMF	breast:	n/a	chr9:21195318-21195336
30	CTCF	chr9:21183043-21183389	A549	lung:	n/a	chr9:21183259-21183277
31	CTCF	chr9:21235860-21236010	GM12875	blood:	n/a	chr9:21235917-21235938
32	CTCF	chr9:21213880-21214030	HCM	heart:	n/a	n/a
33	CTCF	chr9:21183160-21183450	HCT-116	colon:	n/a	chr9:21183259-21183277
34	CTCF	chr9:21213760-21213981	Medullo	brain:	n/a	n/a
35	CTCF	chr9:21183180-21183330	AG04450	lung:	n/a	chr9:21183259-21183277
36	CTCF	chr9:21213780-21213930	HepG2	liver:	n/a	n/a
37	CTCF	chr9:21183120-21183270	MCF-7	breast:	n/a	n/a
38	CTCF	chr9:21213760-21213910	RPTEC	kidney:	n/a	n/a
39	CTCF	chr9:21235792-21236129	MCF-7	breast:	n/a	chr9:21235917-21235938
40	CTCF	chr9:21213840-21213990	GM12869	blood:	n/a	n/a
41	CTCF	chr9:21235834-21236131	HCT-116	colon:	n/a	chr9:21235917-21235938
42	CTCF	chr9:21235840-21235990	HEK293	kidney:	n/a	chr9:21235917-21235938
43	CTCF	chr9:21235840-21235990	GM06990	blood:	n/a	chr9:21235917-21235938
44	CTCF	chr9:21235820-21235970	WERI-Rb-1	eye:	n/a	chr9:21235917-21235938
45	CTCF	chr9:21195260-21195410	AG04449	skin:	n/a	chr9:21195318-21195336
46	CTCF	chr9:21235800-21235950	HCFaa	heart:	n/a	chr9:21235917-21235938
47	CTCF	chr9:21213780-21213924	GM13976	blood:	n/a	n/a
48	CTCF	chr9:21213780-21213930	HUVEC	blood vessel:	n/a	n/a
49	CTCF	chr9:21195191-21195399	NHEK	skin:	n/a	chr9:21195318-21195336
50	CTCF	chr9:21235793-21236036	Hela-S3	cervix:	n/a	chr9:21235917-21235938

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:21239944-21239994	HEEpiC	esophagus:	n/a
2	chr9:21202213-21202263	GM19239	blood:	n/a
3	chr9:21202213-21202263	Hela-S3	cervix:	n/a
4	chr9:21202213-21202263	SK-N-MC	brain:	n/a
5	chr9:21239944-21239994	PrEC	prostate:	n/a
6	chr9:21202213-21202263	AG04450	lung:	fetal
7	chr9:21187344-21187394	HCPEpiC	choroid plexus:	n/a
8	chr9:21239944-21239994	BE2_C	brain:	n/a
9	chr9:21202213-21202263	SK-N-SH_RA	brain:	n/a
10	chr9:21202213-21202263	HCPEpiC	choroid plexus:	n/a
11	chr9:21202213-21202263	T-47D	breast:	n/a
12	chr9:21202213-21202263	U87	brain:	n/a
13	chr9:21202213-21202263	HPAEpiC	pulmonary alveolar:	n/a
14	chr9:21239944-21239994	SKMC	muscle:	n/a
15	chr9:21202213-21202263	Hepatocyte	liver:	n/a
16	chr9:21239944-21239994	HUVEC	blood vessel:	n/a
17	chr9:21239944-21239994	BJ	skin:	n/a
18	chr9:21202213-21202263	NT2-D1	testis:	n/a
19	chr9:21239944-21239994	T-47D	breast:	n/a
20	chr9:21202213-21202263	AG04449	skin:	fetal
21	chr9:21239944-21239994	GM06990	blood:	n/a
22	chr9:21187344-21187394	IMR90	lung:	fetal
23	chr9:21239944-21239994	AoSMC	blood vessel:	n/a
24	chr9:21202213-21202263	MCF-7	breast:	n/a
25	chr9:21187344-21187394	HMEC	breast:	n/a
26	chr9:21202213-21202263	BE2_C	brain:	n/a
27	chr9:21187344-21187394	AG09319	gingival:	n/a
28	chr9:21239944-21239994	A549	lung:	n/a
29	chr9:21239944-21239994	Caco-2	colon:	n/a
30	chr9:21239944-21239994	HPAEpiC	pulmonary alveolar:	n/a
31	chr9:21202213-21202263	HepG2	liver:	n/a
32	chr9:21202213-21202263	PFSK-1	brain:	n/a
33	chr9:21239944-21239994	HepG2	liver:	n/a
34	chr9:21239944-21239994	K562	blood:	n/a
35	chr9:21202213-21202263	GM12892	blood:	n/a
36	chr9:21187344-21187394	GM06990	blood:	n/a
37	chr9:21187344-21187394	ECC-1	luminal epithelium:	n/a
38	chr9:21239944-21239994	SK-N-SH_RA	brain:	n/a
39	chr9:21187344-21187394	MCF10A-Er-Src	breast:	n/a
40	chr9:21239944-21239994	AG04450	lung:	fetal
41	chr9:21187344-21187394	K562	blood:	n/a
42	chr9:21187344-21187394	AG10803	skin:	n/a
43	chr9:21187344-21187394	NH-A	brain:	n/a
44	chr9:21187344-21187394	Jurkat	blood:	n/a
45	chr9:21239944-21239994	HRE	kidney:	n/a
46	chr9:21187344-21187394	HAEpiC	amniotic membrane:	n/a
47	chr9:21202213-21202263	K562	blood:	n/a
48	chr9:21239944-21239994	MCF-7	breast:	n/a
49	chr9:21202213-21202263	HNPCEpiC	eye:	n/a
50	chr9:21239944-21239994	ECC-1	luminal epithelium:	n/a

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-IFNA4-2	chr9:21178588-21179187	NONHSAT130372
2	lnc-IFNA10-1	chr9:21209188-21209778	NONHSAT130374
3	lnc-IFNA4-1	chr9:21190653-21191243	NONHSAT130373
4	lnc-IFNA17-1	chr9:21231265-21231852	NONHSAT130375

Variant related genes	Relation type
IFNA7	TF binding region
IFNA21	TF binding region
IFNWP15	TF binding region
IFNWP9	TF binding region
IFNA17	TF binding region
IFNWP18	TF binding region
IFNA16	TF binding region
IFNA4	TF binding region
IFNA10	TF binding region
IFNWP5	TF binding region
IFNA7	CpG island
IFNA21	CpG island
IFNWP15	CpG island
IFNWP9	CpG island
IFNA17	CpG island
IFNWP18	CpG island
IFNA16	CpG island
IFNA4	CpG island
IFNA10	CpG island
IFNWP5	CpG island

Extended variants
information (count: 1133 )
Associated
traits (count: 155 )

Variant overlapped rSNPs/rCNVs (count:1133 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs201524927	chr9:21166660-21166661	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs8181184	chr9:21166661-21166662	Inactive region	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs16938305	chr9:21166662-21166663	Inactive region	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs8181089	chr9:21166663-21166664	Inactive region	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs564896203	chr9:21166668-21166669	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs527462440	chr9:21166680-21166681	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs56177210	chr9:21166683-21166684	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs182023322	chr9:21166692-21166693	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs186154622	chr9:21166698-21166699	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs530074937	chr9:21166716-21166717	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs549726428	chr9:21166738-21166739	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs189821775	chr9:21166741-21166742	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs148429399	chr9:21166750-21166751	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs7021065	chr9:21168593-21168594	Inactive region	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs539251387	chr9:21168604-21168605	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs553544753	chr9:21168607-21168608	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs116681284	chr9:21168610-21168611	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs535852825	chr9:21168635-21168636	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs375854034	chr9:21168641-21168642	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs555769154	chr9:21168656-21168657	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs371210310	chr9:21168657-21168658	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs185237886	chr9:21168676-21168677	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs371235371	chr9:21168695-21168696	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs544924397	chr9:21168701-21168702	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs2032996	chr9:21168784-21168785	Inactive region	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs189200170	chr9:21168841-21168842	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs181180262	chr9:21168881-21168882	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs17759951	chr9:21168896-21168897	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs561379720	chr9:21168921-21168922	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs530401182	chr9:21168922-21168923	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs150302219	chr9:21168924-21168925	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs368293905	chr9:21168967-21168968	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs570646367	chr9:21168974-21168975	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs533160147	chr9:21169045-21169046	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs184255414	chr9:21169047-21169048	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs558472785	chr9:21169203-21169204	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs578159127	chr9:21169211-21169212	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs551570315	chr9:21169245-21169246	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs142440004	chr9:21169281-21169282	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs115886705	chr9:21169427-21169428	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs114380421	chr9:21169437-21169438	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs186141997	chr9:21169447-21169448	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs561622752	chr9:21169459-21169460	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs139916658	chr9:21169467-21169468	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs543820452	chr9:21169475-21169476	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs141791759	chr9:21169478-21169479	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs144579847	chr9:21169486-21169487	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs546831612	chr9:21169517-21169518	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs537377765	chr9:21169525-21169526	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs192256046	chr9:21169530-21169531	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:155)

Disease	PMID	Source
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Metanephric adenoma	20802469	CNVD
Developmental delay	21147756	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	22183965	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Non-small cell lung cancer	19010865	CNVD
Myoepithelioma	18604193	CNVD
Cancer	22183965	CNVD
Glioblastoma multiforme	21569311	CNVD
Myelofibrosis	22110671	CNVD
Ewing''s sarcoma	22429812	CNVD
Neuroblastoma	21899760	CNVD
Glioblastoma multiforme	19435819	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Glioblastoma multiforme	22291905	CNVD
Lung cancer	21911935	CNVD
Primary central nervous system lymphoma	21088137	CNVD
head and neck squamous cell carcinoma	21798897	CNVD
Cancer	21253487	CNVD
Glioblastoma multiforme	22286061	CNVD
Intracranial ependymoma	16609018	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Glioblastoma multiforme	21922591	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Urothelial cell carcinoma	18451213	CNVD
Glioma	17123091	CNVD
Mental retardation	17124404	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Acute lymphoblastic leukemia	18768390	CNVD
Leukemia	19602459	CNVD
Acute monocytic leukemia	16498392	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Leukemia	18688285	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Acute myeloid leukemia	19651601	CNVD
Coronary Disease	20032323	CNVD
Squamous cell cancer	20885788	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cancer	21732550	CNVD
Gastric cancer	22539939	CNVD
Cancer	21183584	CNVD
T-cell lymphomas	19863542	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Metastatic melanoma	18483359	CNVD
Non-small cell lung cancer	20864512	CNVD
Cervical cancer	21062161	CNVD
Acute myeloid leukemia	16864856	CNVD
Glioblastoma	17090523	CNVD
Lung cancer	16773561	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16774939	CNVD
Bladder cancer	19088036	CNVD
Colorectal cancer	16272173	CNVD
Melanoma	16977458	CNVD
Glioblastoma multiforme	17369134	CNVD
Chagasic megaesophagus	20163722	CNVD
Melanoma	19566914	CNVD
Squamous cell cancer	19047905	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Hodgkin''s lymphoma	18179710	CNVD
Glioma	20126413	CNVD
Glioblastoma multiforme	21525872	CNVD
Melanoma	17363583	CNVD
Glioblastoma multiforme	19115005	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Adenoid cystic carcinoma	18332873	CNVD
Cancer	20581869	CNVD
XY gonadal dysgenesis	20685758	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
Oral cancer	22144094	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Lung cancer	21569311	CNVD
Non-syndromic sensorineural hearing loss	19212409	CNVD
Epilepsy	20502679	CNVD
Barrett''s syndrome	19417022	CNVD

Chromatin state (count:54 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:21169200-21170000	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr9:21174600-21175400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr9:21174600-21175800	Enhancers	Fetal Heart	heart
4	chr9:21176000-21176400	Weak transcription	Fetal Heart	heart
5	chr9:21177400-21177600	Enhancers	Fetal Heart	heart
6	chr9:21182800-21184000	Enhancers	Monocytes-CD14+_RO01746	blood
7	chr9:21183000-21183400	Enhancers	Primary neutrophils fromperipheralblood	blood
8	chr9:21183000-21183400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
9	chr9:21183200-21184000	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr9:21183400-21184000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr9:21195200-21195600	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr9:21195200-21195800	Active TSS	Hela-S3	cervix
13	chr9:21195200-21196000	Enhancers	Primary neutrophils fromperipheralblood	blood
14	chr9:21195200-21196000	Enhancers	Monocytes-CD14+_RO01746	blood
15	chr9:21195400-21195800	Enhancers	Primary hematopoietic stem cells	blood
16	chr9:21195600-21195800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr9:21195600-21196200	Enhancers	GM12878-XiMat	blood
18	chr9:21195600-21196400	Enhancers	Primary monocytes fromperipheralblood	blood
19	chr9:21195800-21196000	Enhancers	Hela-S3	cervix
20	chr9:21196200-21196600	Weak transcription	GM12878-XiMat	blood
21	chr9:21196400-21197600	Weak transcription	Primary monocytes fromperipheralblood	blood
22	chr9:21196600-21197000	Enhancers	GM12878-XiMat	blood
23	chr9:21198000-21198200	Enhancers	Primary monocytes fromperipheralblood	blood
24	chr9:21198200-21198800	Enhancers	Placenta	Placenta
25	chr9:21211400-21211800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr9:21211400-21212200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr9:21228000-21228400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr9:21236000-21236200	Enhancers	Primary hematopoietic stem cells	blood
29	chr9:21236000-21236200	Enhancers	Primary T helper cells fromperipheralblood	blood
30	chr9:21236000-21236200	Bivalent Enhancer	Dnd41	blood
31	chr9:21236000-21236200	Active TSS	Hela-S3	cervix
32	chr9:21236000-21236200	Enhancers	Monocytes-CD14+_RO01746	blood
33	chr9:21236000-21236400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr9:21236000-21236400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
35	chr9:21236000-21236400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
36	chr9:21236000-21236400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr9:21236000-21236600	Enhancers	Primary T helper cells PMA-I stimulated	--
38	chr9:21236000-21236600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
39	chr9:21236000-21236600	Enhancers	Primary T killer memory cells from peripheral blood	blood
40	chr9:21236000-21236800	Enhancers	Primary T cells from cord blood	blood
41	chr9:21236200-21236400	Flanking Active TSS	Hela-S3	cervix
42	chr9:21236200-21236600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
43	chr9:21236200-21236600	Enhancers	Primary T helper naive cells from peripheral blood	blood
44	chr9:21236200-21244600	Weak transcription	Primary hematopoietic stem cells	blood
45	chr9:21236400-21239800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
46	chr9:21236400-21244600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
47	chr9:21239400-21239600	Enhancers	Monocytes-CD14+_RO01746	blood
48	chr9:21239400-21240800	Enhancers	Primary monocytes fromperipheralblood	blood
49	chr9:21239600-21240200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
50	chr9:21239600-21240600	Enhancers	Primary neutrophils fromperipheralblood	blood

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