Variant report
Variant | nsv968755 |
---|---|
Chromosome Location | chr9:141121627-141131456 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs4410858 | chr9:141121662-141121663 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs28657822 | chr9:141121760-141121761 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs28677826 | chr9:141121788-141121789 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs62581264 | chr9:141121831-141121832 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs62429375 | chr9:141121841-141121842 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs62581266 | chr9:141121889-141121890 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs373163166 | chr9:141121897-141121898 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs376647291 | chr9:141121960-141121961 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs537684015 | chr9:141122012-141122013 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs557348359 | chr9:141122013-141122014 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs567995407 | chr9:141122017-141122018 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs369908836 | chr9:141122020-141122021 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs28671602 | chr9:141122023-141122024 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs375670669 | chr9:141122025-141122026 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs370294129 | chr9:141122030-141122031 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs28413101 | chr9:141122072-141122073 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs373227967 | chr9:141122075-141122076 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs12380504 | chr9:141122153-141122154 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs12379626 | chr9:141122162-141122163 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs28561392 | chr9:141122182-141122183 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs376543486 | chr9:141122271-141122272 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs4335077 | chr9:141122327-141122328 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs4916937 | chr9:141122334-141122335 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs12379643 | chr9:141122336-141122337 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs12378590 | chr9:141122346-141122347 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs62581271 | chr9:141122390-141122391 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs12380209 | chr9:141122397-141122398 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs62581273 | chr9:141122453-141122454 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs62581274 | chr9:141122462-141122463 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs62581275 | chr9:141122463-141122464 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs62428745 | chr9:141122467-141122468 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs62428759 | chr9:141122490-141122491 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs62581278 | chr9:141122497-141122498 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs536233379 | chr9:141122506-141122507 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs374345149 | chr9:141122523-141122524 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs12380221 | chr9:141122527-141122528 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs62428756 | chr9:141122553-141122554 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs200320367 | chr9:141122575-141122576 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs62428757 | chr9:141122583-141122584 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs552906432 | chr9:141122586-141122587 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs377671646 | chr9:141122635-141122636 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs201977090 | chr9:141122641-141122642 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs200384955 | chr9:141122646-141122647 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs62581280 | chr9:141122651-141122652 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs201457637 | chr9:141122656-141122657 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs376299797 | chr9:141122661-141122662 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs367676274 | chr9:141122694-141122695 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs371409022 | chr9:141122698-141122699 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs62428743 | chr9:141122701-141122702 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs62581283 | chr9:141122709-141122710 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Leukemia | 17361228 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Glioblastoma | 16823260 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Cardiac fibroma | 18329553 | CNVD |
Lung cancer | 19147751 | CNVD |
Cervical cancer | 17311676 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Gastric cancer | 17908304 | CNVD |
Adenoid cystic carcinoma | 18698036 | CNVD |
Salivary gland adenoid cystic carcinoma | 17545515 | CNVD |
Chordoma | 18071362 | CNVD |
Primary mediastinal b-cell lymphoma | 17728785 | CNVD |
Sudden cardiac death | 19188705 | CNVD |
Myoepithelioma | 18604193 | CNVD |
Tuberous sclerosis | 19566914 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Mantle cell lymphoma | 19029149 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr9:141119400-141123400 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
2 | chr9:141122200-141124800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
3 | chr9:141122400-141124800 | Weak transcription | H9 Cell Line | embryonic stem cell |
4 | chr9:141123400-141123800 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
5 | chr9:141123800-141126000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
6 | chr9:141127600-141128000 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |