Variant report

Variant	nsv968879
Chromosome Location	chr5:17353620-17359144
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:93)
CpG islands
(count:246)
Chromatin interactive
region (count:5)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:93 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BATF	chr5:17354193-17354509	GM12878	blood:	n/a	n/a
2	BATF	chr5:17353871-17354044	GM12878	blood:	n/a	n/a
3	BATF	chr5:17354195-17354502	GM12878	blood:	n/a	n/a
4	CEBPB	chr5:17356262-17356263	A549	lung:	n/a	n/a
5	CEBPB	chr5:17358330-17358340	K562	blood:	n/a	n/a
6	CEBPB	chr5:17356136-17356434	IMR90	lung:	n/a	n/a
7	CHD2	chr5:17356242-17356330	Hela-S3	cervix:	n/a	n/a
8	CTCF	chr5:17357212-17357274	Fibrobl	skin:	n/a	n/a
9	EBF1	chr5:17354257-17354470	GM12878	blood:	n/a	n/a
10	EBF1	chr5:17354246-17354448	GM12878	blood:	n/a	n/a
11	EBF1	chr5:17355821-17355957	GM12878	blood:	n/a	chr5:17355858-17355869
12	FOS	chr5:17356020-17356443	MCF10A-Er-Src	breast:	n/a	chr5:17356250-17356261 chr5:17356172-17356183
13	FOS	chr5:17356035-17356437	MCF10A-Er-Src	breast:	n/a	chr5:17356250-17356261 chr5:17356172-17356183
14	FOS	chr5:17356011-17356504	MCF10A-Er-Src	breast:	n/a	chr5:17356250-17356261 chr5:17356172-17356183
15	FOS	chr5:17356078-17356392	HUVEC	blood vessel:	n/a	chr5:17356250-17356261 chr5:17356172-17356183
16	FOS	chr5:17356012-17356441	MCF10A-Er-Src	breast:	n/a	chr5:17356250-17356261 chr5:17356172-17356183
17	GATA2	chr5:17353802-17354221	K562	blood:	n/a	n/a
18	GATA3	chr5:17358140-17358560	SH-SY5Y	brain:	n/a	n/a
19	HEY1	chr5:17353758-17354777	K562	blood:	n/a	n/a
20	HEY1	chr5:17353756-17354227	HepG2	liver:	n/a	n/a
21	HEY1	chr5:17353803-17353988	HepG2	liver:	n/a	n/a
22	HEY1	chr5:17354496-17354799	HepG2	liver:	n/a	n/a
23	HEY1	chr5:17354309-17354764	K562	blood:	n/a	n/a
24	HEY1	chr5:17354053-17354238	HepG2	liver:	n/a	n/a
25	HEY1	chr5:17354562-17354746	HepG2	liver:	n/a	n/a
26	IRF4	chr5:17353792-17354328	GM12878	blood:	n/a	n/a
27	IRF4	chr5:17353911-17354417	GM12878	blood:	n/a	n/a
28	JUND	chr5:17356232-17356321	K562	blood:	n/a	n/a
29	JUND	chr5:17356977-17357099	HepG2	liver:	n/a	chr5:17357035-17357046
30	MYC	chr5:17356190-17356426	MCF10A-Er-Src	breast:	n/a	n/a
31	MYC	chr5:17354494-17354599	MCF-7	breast:	n/a	n/a
32	MYC	chr5:17356129-17356390	MCF10A-Er-Src	breast:	n/a	n/a
33	PAX5	chr5:17353778-17354526	GM12878	blood:	n/a	n/a
34	PAX5	chr5:17354041-17354271	GM12878	blood:	n/a	n/a
35	POLR2A	chr5:17354345-17354731	A549	lung:	n/a	n/a
36	POLR2A	chr5:17353844-17353989	HepG2	liver:	n/a	n/a
37	POLR2A	chr5:17353843-17354010	A549	lung:	n/a	n/a
38	POLR2A	chr5:17354595-17354757	H1-hESC	embryonic stem cell:	n/a	n/a
39	POLR2A	chr5:17354533-17354753	Hela-S3	cervix:	n/a	n/a
40	POLR2A	chr5:17354202-17354770	GM12891	blood:	n/a	n/a
41	POLR2A	chr5:17353729-17354695	GM12878	blood:	n/a	n/a
42	POLR2A	chr5:17354653-17354726	A549	lung:	n/a	n/a
43	POLR2A	chr5:17354634-17354748	H1-hESC	embryonic stem cell:	n/a	n/a
44	POLR2A	chr5:17354625-17354696	MCF-7	breast:	n/a	n/a
45	POLR2A	chr5:17353811-17354807	GM12891	blood:	n/a	n/a
46	POLR2A	chr5:17354581-17354583	MCF-7	breast:	n/a	n/a
47	POLR2A	chr5:17354463-17354728	HepG2	liver:	n/a	n/a
48	POLR2A	chr5:17354050-17354519	Hela-S3	cervix:	n/a	n/a
49	POLR2A	chr5:17353871-17354037	H1-hESC	embryonic stem cell:	n/a	n/a
50	POLR2A	chr5:17353692-17354737	H1-hESC	embryonic stem cell:	n/a	n/a

(count:246 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:17358665-17358715	Caco-2	colon:	n/a
2	chr5:17354674-17354724	ovcar-3	ovarian:	n/a
3	chr5:17358665-17358715	Caco-2	colon:	n/a
4	chr5:17354674-17354724	ovcar-3	ovarian:	n/a
5	chr5:17354674-17354724	BJ	skin:	n/a
6	chr5:17354504-17354554	MCF-7	breast:	n/a
7	chr5:17354521-17354571	HMEC	breast:	n/a
8	chr5:17354674-17354724	HCF	heart:	n/a
9	chr5:17354674-17354724	AG09319	gingival:	n/a
10	chr5:17358665-17358715	SK-N-SH_RA	brain:	n/a
11	chr5:17354521-17354571	GM12878	blood:	n/a
12	chr5:17358665-17358715	PANC-1	pancreas:	n/a
13	chr5:17358665-17358715	GM12878	blood:	n/a
14	chr5:17354504-17354554	U87	brain:	n/a
15	chr5:17358665-17358715	HIPEpiC	eye:	n/a
16	chr5:17354674-17354724	HCT-116	colon:	n/a
17	chr5:17354521-17354571	SAEC	small airway:	n/a
18	chr5:17358665-17358715	HRE	kidney:	n/a
19	chr5:17358665-17358715	HCPEpiC	choroid plexus:	n/a
20	chr5:17358665-17358715	HCT-116	colon:	n/a
21	chr5:17358665-17358715	MCF10A-Er-Src	breast:	n/a
22	chr5:17358665-17358715	AoSMC	blood vessel:	n/a
23	chr5:17354504-17354554	AG09319	gingival:	n/a
24	chr5:17354521-17354571	HCPEpiC	choroid plexus:	n/a
25	chr5:17354521-17354571	NT2-D1	testis:	n/a
26	chr5:17354674-17354724	Caco-2	colon:	n/a
27	chr5:17354521-17354571	AG04450	lung:	fetal
28	chr5:17354674-17354724	HCPEpiC	choroid plexus:	n/a
29	chr5:17354504-17354554	NH-A	brain:	n/a
30	chr5:17354521-17354571	HL-60	blood:	n/a
31	chr5:17354521-17354571	NB4	blood:	n/a
32	chr5:17354504-17354554	IMR90	lung:	fetal
33	chr5:17354674-17354724	LNCaP	prostate:	n/a
34	chr5:17354521-17354571	MCF10A-Er-Src	breast:	n/a
35	chr5:17358665-17358715	ProgFib	skin:	n/a
36	chr5:17354674-17354724	HNPCEpiC	eye:	n/a
37	chr5:17354521-17354571	SKMC	muscle:	n/a
38	chr5:17354521-17354571	HPAEpiC	pulmonary alveolar:	n/a
39	chr5:17354521-17354571	AG09309	skin:	n/a
40	chr5:17354521-17354571	BJ	skin:	n/a
41	chr5:17358665-17358715	BE2_C	brain:	n/a
42	chr5:17354504-17354554	HMEC	breast:	n/a
43	chr5:17354504-17354554	HCM	heart:	n/a
44	chr5:17358665-17358715	U87	brain:	n/a
45	chr5:17354674-17354724	HUVEC	blood vessel:	n/a
46	chr5:17354674-17354724	ECC-1	luminal epithelium:	n/a
47	chr5:17354504-17354554	RPTEC	kidney:	n/a
48	chr5:17354674-17354724	GM12892	blood:	n/a
49	chr5:17354504-17354554	ovcar-3	ovarian:	n/a
50	chr5:17354504-17354554	T-47D	breast:	n/a

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:17336392..17339049-chr5:17358419..17360973,2	MCF-7	breast:
2	chr11:61734609..61735212-chr5:17354143..17355140,3	Hela-S3	cervix:
3	chr5:17358851..17361817-chr5:17363155..17365630,2	K562	blood:
4	chr5:17216728..17218408-chr5:17358754..17361119,2	MCF-7	breast:
5	chr5:17315557..17317719-chr5:17358059..17359709,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-BASP1-1	chr5:17354019-17354119	ENSG00000248223
2	lnc-BASP1-1	chr5:17354243-17355008	ENSG00000248223

No data

Variant related genes	Relation type
FTH1P10	TF binding region
ENSG00000248223	TF binding region
FTH1P10	CpG island
ENSG00000248223	CpG island
ENSG00000215196	chromatin interactions
ENSG00000176788	chromatin interactions
ENSG00000167996	chromatin interactions

Extended variants
information (count: 258 )
Associated
traits (count: 93 )

Variant overlapped rSNPs/rCNVs (count:258 , 50 per page) page: 1 2 3 4 5 6

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs115345134	chr5:17353706-17353707	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs549528258	chr5:17353723-17353724	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs144319619	chr5:17353734-17353735	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs535327971	chr5:17353766-17353767	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs147808602	chr5:17353772-17353773	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs141227518	chr5:17353799-17353800	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs373084262	chr5:17353804-17353805	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs77011080	chr5:17353820-17353821	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs2650937	chr5:17353828-17353829	Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs146938617	chr5:17353958-17353959	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs558194675	chr5:17353980-17353981	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs186748089	chr5:17353993-17353994	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs543956684	chr5:17353997-17353998	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs2650936	chr5:17353999-17354000	Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs574161601	chr5:17354002-17354003	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs542891845	chr5:17354010-17354011	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs2652639	chr5:17354033-17354034	Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs7733712	chr5:17354037-17354038	Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs7715898	chr5:17354041-17354042	Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs563752349	chr5:17354042-17354043	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
21	rs111864702	chr5:17354089-17354090	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
22	rs549452613	chr5:17354106-17354107	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
23	rs569455030	chr5:17354196-17354197	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs529084938	chr5:17354204-17354205	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs2652638	chr5:17354234-17354235	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs549919862	chr5:17354249-17354250	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
27	rs565926321	chr5:17354274-17354275	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
28	rs112132417	chr5:17354281-17354282	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
29	rs371217793	chr5:17354287-17354288	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
30	rs558157925	chr5:17354288-17354289	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
31	rs375159459	chr5:17354293-17354294	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
32	rs571647532	chr5:17354325-17354326	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
33	rs537476229	chr5:17354344-17354345	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
34	rs377540019	chr5:17354401-17354402	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
35	rs112102038	chr5:17354458-17354459	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
36	rs543158852	chr5:17354462-17354463	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
37	rs374226142	chr5:17354478-17354479	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
38	rs374172545	chr5:17354488-17354489	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
39	rs553297507	chr5:17354491-17354492	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
40	rs573446597	chr5:17354510-17354511	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
41	rs190764013	chr5:17354516-17354517	Weak transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
42	rs565262279	chr5:17354551-17354552	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
43	rs149414851	chr5:17354552-17354553	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
44	rs146363165	chr5:17354554-17354555	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
45	rs563351555	chr5:17354603-17354604	Weak transcription Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
46	rs73054823	chr5:17354621-17354622	Weak transcription Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs549127309	chr5:17354662-17354663	Weak transcription Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
48	rs2652637	chr5:17354665-17354666	Weak transcription Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs138345720	chr5:17354673-17354674	Weak transcription Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
50	rs551685179	chr5:17354674-17354675	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:93)

Disease	PMID	Source
Lung cancer	19547694	CNVD
Cri-du chat syndrome	22283845	CNVD
Disorders of sex development	21048976	CNVD
Non-small cell lung cancer	20864512	CNVD
Cancer	21183584	CNVD
Cervical squamous cell carcinoma	21590768	CNVD
Honadal dysgenesis	21048976	CNVD
Cancer	16751803	CNVD
Breast cancer	17133270	CNVD
Hepatocellular carcinoma	22174799	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Salivary gland tumor	18059337	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Kartagener syndrome	16639409	CNVD
Medulloblastoma	21979893	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	16783165	CNVD
Thyroid cancer	19087340	CNVD
Liposarcoma	21253554	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Cervical Cancer	21857958	CNVD
Cervical cancer	21062161	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Ewing''s sarcoma	17952124	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Cervical cancer	18559093	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Metanephric adenoma	20802469	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Colorectal cancer	21645411	CNVD
Gastric cancer	22152101	CNVD
Oesophago-gastric ulcer	22152101	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Multiple myeloma	17550852	CNVD
prenatal diagnosis	22389664	CNVD
Bladder cancer	21909424	CNVD
DNA damage stimulus	22844521	CNVD
DNA repair	22844521	CNVD
Breast cancer	21785460	CNVD
Spinal muscular atrophy	22422766	CNVD
Spinal muscular atrophy	22558076	CNVD
Spinal muscular atrophy	21320981	CNVD
Spinal muscular atrophy	21762474	CNVD
Breast cancer	21858162	CNVD
Esophageal adenocarcinoma	19417022	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	16608533	CNVD
Anaplastic large cell lymphoma	18179710	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Intellectual disability	22102821	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Williams Syndrome	20824207	CNVD
Breast cancer	21364760	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Acute lymphoblastic leukemia	17640729	CNVD
Myoepithelioma	18604193	CNVD
Lung cancer	16740712	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Melanoma	22183965	CNVD
Renal cell carcinoma	18194544	CNVD
Prostate cancer	21965145	CNVD
Ovarian cancer	20844748	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Breast cancer	17603634	CNVD

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:17344600-17358400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr5:17351400-17354400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr5:17352800-17355800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr5:17354400-17354800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr5:17354800-17366000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr5:17355600-17356000	Enhancers	Primary B cells from peripheral blood	blood
7	chr5:17355600-17356400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr5:17355800-17356000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr5:17355800-17356000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr5:17355800-17356000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr5:17355800-17356600	Enhancers	Muscle Satellite Cultured Cells	--
12	chr5:17355800-17356600	Enhancers	NHDF-Ad	bronchial
13	chr5:17356000-17356200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr5:17356000-17356400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr5:17356000-17356800	ZNF genes & repeats	Primary B cells from peripheral blood	blood
16	chr5:17356000-17359400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr5:17356200-17356400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr5:17356200-17356800	Enhancers	Primary monocytes fromperipheralblood	blood
19	chr5:17356200-17356800	Enhancers	Primary B cells from cord blood	blood
20	chr5:17356200-17357000	Enhancers	Monocytes-CD14+_RO01746	blood
21	chr5:17356400-17356800	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr5:17356400-17357200	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr5:17356400-17358000	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr5:17356600-17359000	Weak transcription	NHDF-Ad	bronchial
25	chr5:17356600-17359400	Weak transcription	Muscle Satellite Cultured Cells	--
26	chr5:17356800-17357000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr5:17356800-17359000	Weak transcription	Primary B cells from cord blood	blood
28	chr5:17356800-17359400	Weak transcription	Primary monocytes fromperipheralblood	blood
29	chr5:17357000-17359600	Weak transcription	Monocytes-CD14+_RO01746	blood
30	chr5:17358000-17359400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr5:17358600-17358800	Enhancers	Placenta	Placenta
32	chr5:17358800-17359800	Weak transcription	Placenta	Placenta
33	chr5:17358800-17360000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr5:17359000-17360800	Enhancers	NHDF-Ad	bronchial

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links