Variant report

Variant nsv969377
Chromosome Location chr6:30659579-30667545
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:312 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30657400-30659600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr6:30657600-30659600 Flanking Active TSS Primary hematopoietic stem cells blood
3 chr6:30657800-30659600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
4 chr6:30658200-30659600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
5 chr6:30658400-30659600 Active TSS iPS-20b Cell Line embryonic stem cell
6 chr6:30658800-30660400 Enhancers Placenta Placenta
7 chr6:30658800-30662400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr6:30658800-30668200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr6:30658800-30670200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr6:30658800-30670400 Weak transcription Lung lung
11 chr6:30659000-30659600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr6:30659000-30659600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
13 chr6:30659000-30659600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr6:30659000-30659600 Flanking Active TSS Liver Liver
15 chr6:30659000-30659600 Enhancers Placenta Amnion Placenta Amnion
16 chr6:30659000-30659600 Flanking Active TSS A549 lung
17 chr6:30659000-30659600 Flanking Active TSS Dnd41 blood
18 chr6:30659000-30659600 Flanking Active TSS GM12878-XiMat blood
19 chr6:30659000-30659600 Flanking Active TSS NHEK skin
20 chr6:30659000-30663600 Weak transcription Pancreas Pancrea
21 chr6:30659000-30669800 Weak transcription Left Ventricle heart
22 chr6:30659000-30670200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr6:30659000-30670200 Weak transcription Esophagus oesophagus
24 chr6:30659000-30670200 Weak transcription Gastric stomach
25 chr6:30659000-30670200 Weak transcription Ovary ovary
26 chr6:30659000-30670200 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr6:30659000-30670200 Weak transcription Spleen Spleen
28 chr6:30659000-30670400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr6:30659000-30670800 Weak transcription Right Ventricle heart
30 chr6:30659200-30659600 Enhancers H1 Cell Line embryonic stem cell
31 chr6:30659200-30659600 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr6:30659200-30659600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr6:30659200-30659600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
34 chr6:30659200-30659600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
35 chr6:30659200-30659600 Enhancers Primary monocytes fromperipheralblood blood
36 chr6:30659200-30659600 Enhancers Primary neutrophils fromperipheralblood blood
37 chr6:30659200-30659600 Enhancers Primary B cells from cord blood blood
38 chr6:30659200-30659600 Enhancers Primary B cells from peripheral blood blood
39 chr6:30659200-30659600 Enhancers Primary T cells from cord blood blood
40 chr6:30659200-30659600 Enhancers Primary T cells fromperipheralblood blood
41 chr6:30659200-30659600 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr6:30659200-30659600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
43 chr6:30659200-30659600 Enhancers Primary T helper naive cells from peripheral blood blood
44 chr6:30659200-30659600 Enhancers Primary T helper naive cells fromperipheralblood blood
45 chr6:30659200-30659600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
46 chr6:30659200-30659600 Enhancers Primary T helper cells fromperipheralblood blood
47 chr6:30659200-30659600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
48 chr6:30659200-30659600 Enhancers Primary Natural Killer cells fromperipheralblood blood
49 chr6:30659200-30659600 Enhancers Cortex derived primary cultured neurospheres brain
50 chr6:30659200-30659600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin

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