Variant report

Variant	nsv9699
Chromosome Location	chr19:24358579-24360302
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 109 )
Associated
traits (count: 42 )

Variant overlapped rSNPs/rCNVs (count:109 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs559971999	chr19:24358589-24358590	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs183132766	chr19:24358678-24358679	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs77733024	chr19:24358697-24358698	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs147924862	chr19:24358703-24358704	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs531289149	chr19:24358721-24358722	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs372499006	chr19:24358740-24358741	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs549811736	chr19:24358744-24358745	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs4425022	chr19:24358745-24358746	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs538457689	chr19:24358755-24358756	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs188217357	chr19:24358757-24358758	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs191763579	chr19:24358785-24358786	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs183681752	chr19:24358828-24358829	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs540070393	chr19:24358830-24358831	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs574404990	chr19:24358845-24358846	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs187382272	chr19:24358852-24358853	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs537165990	chr19:24358880-24358881	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs535555736	chr19:24358882-24358883	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs540875506	chr19:24358891-24358892	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs141790765	chr19:24358919-24358920	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs573704177	chr19:24358925-24358926	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs540989439	chr19:24358927-24358928	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs560672060	chr19:24358930-24358931	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs553693848	chr19:24358937-24358938	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs536061703	chr19:24358941-24358942	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs546012025	chr19:24358950-24358951	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs145654936	chr19:24358951-24358952	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs377101370	chr19:24358963-24358964	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs192565738	chr19:24358975-24358976	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs529448911	chr19:24358994-24358995	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs543542183	chr19:24358999-24359000	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs548822445	chr19:24359005-24359006	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs561725429	chr19:24359048-24359049	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs528936961	chr19:24359060-24359061	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs562576294	chr19:24359072-24359073	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs547412677	chr19:24359097-24359098	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs566389733	chr19:24359130-24359131	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs151129053	chr19:24359137-24359138	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs184792133	chr19:24359141-24359142	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs186897836	chr19:24359143-24359144	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs537604403	chr19:24359145-24359146	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs555452517	chr19:24359156-24359157	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs567414872	chr19:24359157-24359158	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs58880812	chr19:24359161-24359162	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs552929090	chr19:24359169-24359170	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs531238526	chr19:24359186-24359187	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs201474816	chr19:24359195-24359196	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs150090488	chr19:24359202-24359203	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs550949208	chr19:24359250-24359251	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs557983110	chr19:24359253-24359254	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs576167175	chr19:24359256-24359257	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:42)

Disease	PMID	Source
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Prostate cancer	16573809	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Colorectal cancer	20459617	CNVD
Ductal carcinoma	22052326	CNVD
Cancer	20164920	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Autism	19287141	CNVD
early-passage human iPS cells	21368824	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:24337000-24359200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr19:24357400-24360200	Weak transcription	Ovary	ovary
3	chr19:24360200-24361000	ZNF genes & repeats	Ovary	ovary

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