Variant report

Variant	nsv9700
Chromosome Location	chr19:24360524-24364384
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 304 )
Associated
traits (count: 42 )

Variant overlapped rSNPs/rCNVs (count:304 , 50 per page) page: 1 2 3 4 5 6 7

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4986347	chr19:24360538-24360539	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs567528191	chr19:24360554-24360555	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs150618738	chr19:24360557-24360558	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs554889371	chr19:24360566-24360567	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs573178124	chr19:24360570-24360571	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs540504376	chr19:24360572-24360573	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs565490307	chr19:24360574-24360575	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs139708091	chr19:24360580-24360581	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs544697368	chr19:24360581-24360582	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs144705711	chr19:24360587-24360588	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs376268818	chr19:24360589-24360590	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs116374013	chr19:24360605-24360606	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs528373888	chr19:24360615-24360616	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs370956845	chr19:24360620-24360621	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs140079286	chr19:24360621-24360622	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs73031005	chr19:24360647-24360648	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs17620072	chr19:24360652-24360653	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs145560578	chr19:24360666-24360667	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs115366573	chr19:24360667-24360668	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs554128647	chr19:24360691-24360692	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs572714475	chr19:24360692-24360693	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs558243826	chr19:24360696-24360697	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs571684209	chr19:24360701-24360702	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs76728175	chr19:24360712-24360713	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs558939026	chr19:24360713-24360714	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs369301956	chr19:24360723-24360724	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs554197773	chr19:24360735-24360736	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs190543595	chr19:24360737-24360738	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs563019649	chr19:24360740-24360741	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs530197891	chr19:24360742-24360743	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs542280827	chr19:24360746-24360747	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs530104453	chr19:24360749-24360750	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs145387102	chr19:24360756-24360757	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs118095297	chr19:24360757-24360758	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs546879520	chr19:24360790-24360791	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs574261804	chr19:24360800-24360801	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs370354589	chr19:24360804-24360805	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs542894195	chr19:24360805-24360806	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs556717457	chr19:24360821-24360822	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs576184753	chr19:24360835-24360836	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs575736083	chr19:24360860-24360861	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs73031006	chr19:24360869-24360870	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs374781866	chr19:24360897-24360898	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs183543871	chr19:24360916-24360917	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs535956607	chr19:24360923-24360924	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs141686005	chr19:24360937-24360938	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs66972560	chr19:24360940-24360941	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs540607617	chr19:24360947-24360948	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs371320217	chr19:24360948-24360949	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs74523508	chr19:24360956-24360957	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:42)

Disease	PMID	Source
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Prostate cancer	16573809	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Colorectal cancer	20459617	CNVD
Ductal carcinoma	22052326	CNVD
Cancer	20164920	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Autism	19287141	CNVD
early-passage human iPS cells	21368824	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:24360200-24361000	ZNF genes & repeats	Ovary	ovary
2	chr19:24360400-24361400	ZNF genes & repeats	Fetal Brain Female	brain
3	chr19:24360400-24361600	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr19:24360400-24362200	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
5	chr19:24360400-24363600	ZNF genes & repeats	Liver	Liver
6	chr19:24360600-24361800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr19:24360600-24363400	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
8	chr19:24360600-24364400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
9	chr19:24361400-24362600	ZNF genes & repeats	Fetal Lung	lung
10	chr19:24362400-24364400	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
11	chr19:24363000-24364000	ZNF genes & repeats	Adipose Nuclei	Adipose
12	chr19:24364000-24365600	Enhancers	Primary neutrophils fromperipheralblood	blood

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