Variant report
Variant | nsv970030 |
---|---|
Chromosome Location | chr6:27880682-27909942 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:113)
- CpG islands (count:183)
- Chromatin interactive region (count:25)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr6:27908618-27908866 | K562 | blood: | n/a | n/a |
2 | ATF1 | chr6:27908604-27908854 | K562 | blood: | n/a | n/a |
3 | ATF3 | chr6:27908522-27908861 | K562 | blood: | n/a | n/a |
4 | BACH1 | chr6:27905930-27905955 | K562 | blood: | n/a | n/a |
5 | CBX3 | chr6:27908533-27908904 | K562 | blood: | n/a | n/a |
6 | CCNT2 | chr6:27908660-27908818 | K562 | blood: | n/a | n/a |
7 | CEBPB | chr6:27902904-27903120 | HepG2 | liver: | n/a | chr6:27902999-27903010 |
8 | CEBPB | chr6:27899099-27899316 | HepG2 | liver: | n/a | chr6:27899205-27899216 |
9 | CEBPB | chr6:27899131-27899246 | K562 | blood: | n/a | chr6:27899205-27899216 |
10 | CEBPB | chr6:27908564-27908958 | K562 | blood: | n/a | n/a |
11 | CEBPD | chr6:27908488-27908996 | K562 | blood: | n/a | n/a |
12 | CREB1 | chr6:27898967-27899442 | K562 | blood: | n/a | n/a |
13 | CTCF | chr6:27898009-27898053 | Fibrobl | skin: | n/a | n/a |
14 | CTCF | chr6:27900660-27900711 | Lung_OC | lung: | n/a | n/a |
15 | CTCF | chr6:27896500-27896650 | HepG2 | liver: | n/a | n/a |
16 | CTCF | chr6:27891701-27891752 | GM20000 | blood: | n/a | n/a |
17 | CUX1 | chr6:27887384-27887567 | K562 | blood: | n/a | n/a |
18 | CUX1 | chr6:27890200-27890234 | K562 | blood: | n/a | n/a |
19 | EP300 | chr6:27908612-27908866 | K562 | blood: | n/a | chr6:27908689-27908698 chr6:27908690-27908699 |
20 | EP300 | chr6:27886541-27886711 | K562 | blood: | n/a | n/a |
21 | EP300 | chr6:27908476-27908801 | K562 | blood: | n/a | chr6:27908689-27908698 chr6:27908690-27908699 |
22 | FOS | chr6:27908597-27908807 | MCF10A-Er-Src | breast: | n/a | chr6:27908691-27908702 chr6:27908690-27908698 chr6:27908689-27908698 chr6:27908690-27908697 chr6:27908688-27908700 |
23 | FOS | chr6:27908660-27908867 | MCF10A-Er-Src | breast: | n/a | chr6:27908691-27908702 chr6:27908690-27908698 chr6:27908689-27908698 chr6:27908690-27908697 chr6:27908688-27908700 |
24 | FOS | chr6:27908631-27908831 | MCF10A-Er-Src | breast: | n/a | chr6:27908691-27908702 chr6:27908690-27908698 chr6:27908689-27908698 chr6:27908690-27908697 chr6:27908688-27908700 |
25 | FOS | chr6:27908612-27908753 | MCF10A-Er-Src | breast: | n/a | chr6:27908691-27908702 chr6:27908690-27908698 chr6:27908689-27908698 chr6:27908690-27908697 chr6:27908688-27908700 |
26 | FOSL1 | chr6:27908562-27908857 | K562 | blood: | n/a | chr6:27908691-27908702 chr6:27908690-27908698 chr6:27908689-27908698 chr6:27908690-27908697 chr6:27908688-27908700 |
27 | GATA2 | chr6:27900958-27901132 | SH-SY5Y | brain: | n/a | n/a |
28 | GATA2 | chr6:27908462-27908989 | K562 | blood: | n/a | chr6:27908691-27908700 |
29 | HEY1 | chr6:27896783-27897037 | K562 | blood: | n/a | n/a |
30 | JUN | chr6:27899023-27899304 | HepG2 | liver: | n/a | chr6:27899153-27899162 chr6:27899149-27899162 |
31 | JUN | chr6:27908538-27908882 | K562 | blood: | n/a | chr6:27908691-27908702 chr6:27908690-27908698 chr6:27908689-27908698 chr6:27908690-27908697 chr6:27908688-27908700 |
32 | JUN | chr6:27908584-27908925 | K562 | blood: | n/a | chr6:27908691-27908702 chr6:27908690-27908698 chr6:27908689-27908698 chr6:27908690-27908697 chr6:27908688-27908700 |
33 | JUN | chr6:27908591-27908890 | K562 | blood: | n/a | chr6:27908691-27908702 chr6:27908690-27908698 chr6:27908689-27908698 chr6:27908690-27908697 chr6:27908688-27908700 |
34 | JUND | chr6:27899011-27899295 | HepG2 | liver: | n/a | chr6:27899153-27899162 |
35 | JUND | chr6:27908639-27908833 | HepG2 | liver: | n/a | chr6:27908691-27908702 chr6:27908690-27908698 chr6:27908689-27908698 chr6:27908690-27908697 chr6:27908688-27908700 chr6:27908688-27908699 |
36 | JUND | chr6:27908527-27908919 | K562 | blood: | n/a | chr6:27908691-27908702 chr6:27908690-27908698 chr6:27908689-27908698 chr6:27908690-27908697 chr6:27908688-27908700 chr6:27908688-27908699 |
37 | MAFF | chr6:27885377-27885630 | HepG2 | liver: | n/a | n/a |
38 | MAFF | chr6:27890867-27891008 | K562 | blood: | n/a | chr6:27890938-27890956 |
39 | MAFF | chr6:27890798-27891085 | HepG2 | liver: | n/a | chr6:27890938-27890956 |
40 | MAFK | chr6:27883244-27883259 | HepG2 | liver: | n/a | n/a |
41 | MAFK | chr6:27890849-27891087 | HepG2 | liver: | n/a | n/a |
42 | MAFK | chr6:27885338-27885673 | HepG2 | liver: | n/a | n/a |
43 | MAFK | chr6:27883205-27883299 | HepG2 | liver: | n/a | chr6:27883264-27883279 chr6:27883261-27883277 chr6:27883259-27883279 |
44 | MAFK | chr6:27885435-27885630 | IMR90 | lung: | n/a | n/a |
45 | MAFK | chr6:27885362-27885629 | HepG2 | liver: | n/a | n/a |
46 | MAFK | chr6:27891463-27891649 | HepG2 | liver: | n/a | n/a |
47 | MAFK | chr6:27890858-27891033 | K562 | blood: | n/a | n/a |
48 | MAZ | chr6:27888049-27888206 | HepG2 | liver: | n/a | n/a |
49 | NR2F2 | chr6:27908480-27908907 | K562 | blood: | n/a | n/a |
50 | NR2F2 | chr6:27908541-27908913 | K562 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr6:27880822-27880872 | NHBE | bronchial: | n/a |
2 | chr6:27880822-27880872 | ProgFib | skin: | n/a |
3 | chr6:27880954-27881004 | SAEC | small airway: | n/a |
4 | chr6:27880822-27880872 | NH-A | brain: | n/a |
5 | chr6:27880822-27880872 | HIPEpiC | eye: | n/a |
6 | chr6:27880822-27880872 | LNCaP | prostate: | n/a |
7 | chr6:27880954-27881004 | BE2_C | brain: | n/a |
8 | chr6:27880954-27881004 | ovcar-3 | ovarian: | n/a |
9 | chr6:27880954-27881004 | HCF | heart: | n/a |
10 | chr6:27880954-27881004 | HCPEpiC | choroid plexus: | n/a |
11 | chr6:27880822-27880872 | MCF10A-Er-Src | breast: | n/a |
12 | chr6:27880954-27881004 | HL-60 | blood: | n/a |
13 | chr6:27881242-27881292 | RPTEC | kidney: | n/a |
14 | chr6:27880954-27881004 | ProgFib | skin: | n/a |
15 | chr6:27881242-27881292 | HEK293 | kidney: | embryo |
16 | chr6:27880822-27880872 | AG10803 | skin: | n/a |
17 | chr6:27880954-27881004 | RPTEC | kidney: | n/a |
18 | chr6:27880822-27880872 | Jurkat | blood: | n/a |
19 | chr6:27880822-27880872 | HCT-116 | colon: | n/a |
20 | chr6:27880822-27880872 | T-47D | breast: | n/a |
21 | chr6:27880822-27880872 | PFSK-1 | brain: | n/a |
22 | chr6:27881242-27881292 | HUVEC | blood vessel: | n/a |
23 | chr6:27881242-27881292 | PFSK-1 | brain: | n/a |
24 | chr6:27880954-27881004 | NHDF-neo | bronchial: | n/a |
25 | chr6:27880822-27880872 | AG09309 | skin: | n/a |
26 | chr6:27880954-27881004 | SK-N-MC | brain: | n/a |
27 | chr6:27880822-27880872 | U87 | brain: | n/a |
28 | chr6:27880954-27881004 | PANC-1 | pancreas: | n/a |
29 | chr6:27881242-27881292 | HCF | heart: | n/a |
30 | chr6:27881242-27881292 | IMR90 | lung: | fetal |
31 | chr6:27881242-27881292 | H1-hESC | embryonic stem cell: | embryo |
32 | chr6:27880822-27880872 | A549 | lung: | n/a |
33 | chr6:27881242-27881292 | NB4 | blood: | n/a |
34 | chr6:27881242-27881292 | AG09319 | gingival: | n/a |
35 | chr6:27880822-27880872 | GM12878 | blood: | n/a |
36 | chr6:27881242-27881292 | PrEC | prostate: | n/a |
37 | chr6:27880954-27881004 | PrEC | prostate: | n/a |
38 | chr6:27881242-27881292 | HMEC | breast: | n/a |
39 | chr6:27880954-27881004 | A549 | lung: | n/a |
40 | chr6:27880822-27880872 | Hepatocyte | liver: | n/a |
41 | chr6:27880954-27881004 | HCT-116 | colon: | n/a |
42 | chr6:27881242-27881292 | CMK | blood: | n/a |
43 | chr6:27880954-27881004 | HIPEpiC | eye: | n/a |
44 | chr6:27880954-27881004 | IMR90 | lung: | fetal |
45 | chr6:27880822-27880872 | AG09319 | gingival: | n/a |
46 | chr6:27880954-27881004 | NB4 | blood: | n/a |
47 | chr6:27881242-27881292 | HepG2 | liver: | n/a |
48 | chr6:27881242-27881292 | ovcar-3 | ovarian: | n/a |
49 | chr6:27880822-27880872 | AG04450 | lung: | fetal |
50 | chr6:27880822-27880872 | HUVEC | blood vessel: | n/a |
(count:25 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr6:27906019..27908649-chr6:27909756..27911913,2 | K562 | blood: | |
2 | chr6:27900872..27904331-chr6:27905533..27908216,3 | K562 | blood: | |
3 | chr6:27869224..27870861-chr6:27906811..27908499,2 | K562 | blood: | |
4 | chr6:27900872..27904331-chr6:27905533..27908216,3 | K562 | blood: | |
5 | chr6:27890672..27893194-chr6:27950169..27951768,2 | K562 | blood: | |
6 | chr6:27884862..27886934-chr6:27890220..27891868,2 | MCF-7 | breast: | |
7 | chr6:27888989..27890885-chr6:27892239..27894866,2 | MCF-7 | breast: | |
8 | chr6:27857667..27861764-chr6:27891119..27894873,6 | K562 | blood: | |
9 | chr6:27882241..27884858-chr6:27901500..27903298,2 | K562 | blood: | |
10 | chr6:27882241..27884858-chr6:27901500..27903298,2 | K562 | blood: | |
11 | chr6:27884862..27886934-chr6:27890220..27891868,2 | MCF-7 | breast: | |
12 | chr6:27778583..27780437-chr6:27901055..27904160,3 | K562 | blood: | |
13 | chr6:27894600..27896856-chr6:27897179..27899651,3 | K562 | blood: | |
14 | chr6:27906019..27908649-chr6:27909756..27911913,2 | K562 | blood: | |
15 | chr6:27890558..27893641-chr6:27899423..27901654,3 | K562 | blood: | |
16 | chr6:27774964..27777447-chr6:27902670..27905065,2 | K562 | blood: | |
17 | chr6:27901905..27904183-chr6:28041057..28044024,2 | K562 | blood: | |
18 | chr6:27880639..27883461-chr7:11306851..11309270,2 | MCF-7 | breast: | |
19 | chr6:27890558..27893641-chr6:27899423..27901654,3 | K562 | blood: | |
20 | chr6:27905285..27912363-chr6:27912383..27920173,13 | K562 | blood: | |
21 | chr6:27877630..27879504-chr6:27883396..27885333,2 | MCF-7 | breast: | |
22 | chr6:27888989..27890885-chr6:27892239..27894866,2 | MCF-7 | breast: | |
23 | chr6:27859035..27860980-chr6:27897305..27900067,2 | K562 | blood: | |
24 | chr6:27894600..27896856-chr6:27897179..27899651,3 | K562 | blood: | |
25 | chr6:27868676..27871582-chr6:27889227..27891930,6 | K562 | blood: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
OR2B2 | TF binding region |
OR2W6P | TF binding region |
OR2B2 | CpG island |
OR2W6P | CpG island |
ENSG00000197153 | chromatin interactions |
ENSG00000233224 | chromatin interactions |
ENSG00000220721 | chromatin interactions |
ENSG00000196331 | chromatin interactions |
ENSG00000196747 | chromatin interactions |
ENSG00000185130 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs555858185 | chr6:27880720-27880721 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs546469219 | chr6:27880757-27880758 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs190576417 | chr6:27880821-27880822 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs149318186 | chr6:27880842-27880843 | Weak transcription | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs373568163 | chr6:27880896-27880897 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs56219068 | chr6:27880904-27880905 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs541688680 | chr6:27880968-27880969 | Weak transcription | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs144573038 | chr6:27881003-27881004 | Weak transcription | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs533622318 | chr6:27881016-27881017 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs139296255 | chr6:27881020-27881021 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs563100578 | chr6:27881038-27881039 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs183054075 | chr6:27881085-27881086 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs12181629 | chr6:27881147-27881148 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
14 | rs565484049 | chr6:27881198-27881199 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs528259710 | chr6:27881243-27881244 | Weak transcription | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs76682782 | chr6:27881270-27881271 | Weak transcription | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
17 | rs556802844 | chr6:27881313-27881314 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs145970942 | chr6:27881359-27881360 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs536914028 | chr6:27881360-27881361 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs139851179 | chr6:27881382-27881383 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs9885649 | chr6:27881406-27881407 | Enhancers Weak transcription | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
22 | rs115639664 | chr6:27881420-27881421 | Enhancers Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs552330126 | chr6:27881461-27881462 | Enhancers Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
24 | rs555572649 | chr6:27881515-27881516 | Enhancers Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
25 | rs142070500 | chr6:27881532-27881533 | Enhancers Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
26 | rs370187259 | chr6:27881551-27881552 | Enhancers Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
27 | rs368286251 | chr6:27881554-27881555 | Enhancers Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
28 | rs558353649 | chr6:27881562-27881563 | Enhancers Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
29 | rs578226273 | chr6:27881589-27881590 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs543740147 | chr6:27881620-27881621 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs151139454 | chr6:27881623-27881624 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs186375860 | chr6:27881654-27881655 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs538398369 | chr6:27881671-27881672 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs140019722 | chr6:27881686-27881687 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs75249060 | chr6:27881721-27881722 | Enhancers Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
36 | rs149851646 | chr6:27881775-27881776 | Enhancers Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
37 | rs551078182 | chr6:27881794-27881795 | Enhancers Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
38 | rs147945313 | chr6:27881809-27881810 | Enhancers Weak transcription Strong transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
39 | rs200945 | chr6:27881904-27881905 | Enhancers Weak transcription Strong transcription | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
40 | rs550598360 | chr6:27881915-27881916 | Enhancers Weak transcription Strong transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
41 | rs567594997 | chr6:27882097-27882098 | Enhancers Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs115150975 | chr6:27882115-27882116 | Enhancers Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs549352620 | chr6:27882220-27882221 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs535084416 | chr6:27882224-27882225 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs558315413 | chr6:27882226-27882227 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs578199381 | chr6:27882356-27882357 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs547160262 | chr6:27882367-27882368 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs202195532 | chr6:27882388-27882389 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs190986675 | chr6:27882408-27882409 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs182690996 | chr6:27882418-27882419 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Acute lymphoblastic leukemia | 22237106 | CNVD |
Follicular lymphoma | 20505157 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Leukemia | 21518781 | CNVD |
Cancer | 21637783 | CNVD |
Facial dysmorphism | 22105932 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Diffuse large b-cell lymphoma | 18287131 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Breast cancer | 21264507 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Cancer | 16751803 | CNVD |
Bladder cancer | 19088036 | CNVD |
Wilms tumour | 21544195 | CNVD |
Uveal melanoma | 21693616 | CNVD |
Biliary cancer | 19435499 | CNVD |
Malaria | 21533027 | CNVD |
Retinoblastoma | 19183342 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 21858162 | CNVD |
Lung cancer | 18438408 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Gastric cancer | 16891809 | CNVD |
Ovarian cancer | 21781307 | CNVD |
Autism | 21448237 | CNVD |
Cancer | 20164919 | CNVD |
Melanoma | 18172304 | CNVD |
Breast cancer | 22844521 | CNVD |
HIV/AIDS | 22844521 | CNVD |
Ovarian cancer | 22844521 | CNVD |
Prostate cancer | 22844521 | CNVD |
Psoriasis | 22844521 | CNVD |
Rheumatoid arthritis | 22844521 | CNVD |
Sclerosis systemic | 22844521 | CNVD |
Systemic lupus erythematosus | 22844521 | CNVD |
Breast cancer | 22522925 | CNVD |
Breast cancer | 21552322 | CNVD |
Immune disease | 21076436 | CNVD |
Autoimmune disease | 19135723 | CNVD |
Systemic lupus erythematosus | 17953491 | CNVD |
Recurrent Infections | 22737222 | CNVD |
Systemic lupus erythematosus | 21904924 | CNVD |
Ependymoma | 19289631 | CNVD |
Gestational infection | 22844521 | CNVD |
Head circumference | 22844521 | CNVD |
Infertility | 22844521 | CNVD |
Recurrent birth weight diabetes | 22844521 | CNVD |
Obesity | 22844521 | CNVD |
Recurrent pregnancy loss | 22844521 | CNVD |
Intellectual disability | 21811512 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Congenital anomalies of the kidney and urinary tract | 18694510 | CNVD |
Nasopharyngeal cancer | 22815911 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Basal cell lymphoma | 21115979 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Breast cancer | 17133270 | CNVD |
Autism | 22495311 | CNVD |
Cancer | 16790693 | CNVD |
Breast cancer | 22032731 | CNVD |
Cervical cancer | 21062161 | CNVD |
Breast cancer | 21785460 | CNVD |
Retinoblastoma | 16790693 | CNVD |
Esophageal adenocarcinoma | 18820669 | CNVD |
Systemic lupus erythematosus | 17503323 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Urothelial carcinoma | 18382360 | CNVD |
Cancer | 21183584 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Renal cell carcinoma | 18765545 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Gastric cancer | 17908304 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Breast cancer | 16397240 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Breast cancer | 21364760 | CNVD |
Schizophrenia | 19571809 | CNVD |
Schizophrenia | 19571808 | CNVD |
Malignant peripheral nerve sheath tumor | 18522746 | CNVD |
Neuroblastoma | 16790693 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:27871600-27883200 | Weak transcription | Hela-S3 | cervix |
2 | chr6:27880000-27881800 | Weak transcription | K562 | blood |
3 | chr6:27880200-27881400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
4 | chr6:27881400-27881600 | Enhancers | Primary hematopoietic stem cells | blood |
5 | chr6:27881400-27881600 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
6 | chr6:27881400-27882400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
7 | chr6:27881400-27882400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
8 | chr6:27881800-27882200 | Strong transcription | K562 | blood |
9 | chr6:27882000-27882200 | Enhancers | Primary hematopoietic stem cells | blood |
10 | chr6:27882200-27882400 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
11 | chr6:27882200-27886800 | Weak transcription | K562 | blood |
12 | chr6:27886600-27886800 | Bivalent/Poised TSS | Primary Natural Killer cells fromperipheralblood | blood |
13 | chr6:27886800-27892600 | Strong transcription | K562 | blood |
14 | chr6:27892000-27892400 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
15 | chr6:27892000-27892400 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
16 | chr6:27892000-27892400 | Enhancers | NHEK | skin |
17 | chr6:27892600-27893800 | Weak transcription | K562 | blood |
18 | chr6:27893800-27895800 | Strong transcription | K562 | blood |
19 | chr6:27895800-27896400 | Weak transcription | K562 | blood |
20 | chr6:27896400-27896800 | Enhancers | Rectal Mucosa Donor 31 | rectum |
21 | chr6:27896400-27898800 | Strong transcription | K562 | blood |
22 | chr6:27898800-27900600 | Weak transcription | K562 | blood |
23 | chr6:27900600-27901200 | Enhancers | K562 | blood |
24 | chr6:27901200-27902400 | Weak transcription | K562 | blood |
25 | chr6:27902400-27908600 | Strong transcription | K562 | blood |
26 | chr6:27908600-27909600 | Genic enhancers | K562 | blood |
27 | chr6:27909600-27913600 | Weak transcription | K562 | blood |