Variant report
| Variant | nsv970067 |
|---|---|
| Chromosome Location | chr6:122946-139332 |
| allele | n/a |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:2)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
(count:2 , 50 per page) page:
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| No. | lncRNA name | Chromosome Location | lncRNA alias |
|---|---|---|---|
| 1 | lnc-EXOC2-7 | chr6:130803-133193 | NONHSAT105967 |
| 2 | lnc-EXOC2-7 | chr6:134462-134855 | NONHSAT105967 |
| No data |
| No data |
| No data |
Variant overlapped rSNPs/rCNVs (count:20 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | rs374138102 | chr6:130852-130853 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 2 | rs376237803 | chr6:130927-130928 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 3 | rs370343744 | chr6:131094-131095 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 4 | rs374063355 | chr6:131634-131635 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 5 | rs201496564 | chr6:131967-131968 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 6 | rs372692824 | chr6:132019-132020 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 7 | rs201148468 | chr6:132230-132231 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 8 | rs186119096 | chr6:132283-132284 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 9 | rs199568457 | chr6:132284-132285 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 10 | rs189840094 | chr6:132285-132286 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 11 | rs374521237 | chr6:132316-132317 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 12 | rs368525221 | chr6:132349-132350 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 13 | rs372827538 | chr6:132357-132358 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 14 | rs375294155 | chr6:132419-132420 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 15 | rs377476763 | chr6:132528-132529 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 16 | rs375455059 | chr6:132544-132545 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 17 | rs371029441 | chr6:132572-132573 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 18 | rs372495238 | chr6:132577-132578 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 19 | rs376806417 | chr6:132635-132636 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
| 20 | rs4036210 | chr6:132870-132871 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
Variant related diseases (count:56)
| Disease | PMID | Source |
|---|---|---|
| Chronic lymphocytic leukemia | 21546498 | CNVD |
| Myelofibrosis | 22110671 | CNVD |
| Barrett''s adenocarcinoma | 18663352 | CNVD |
| Prader-willi syndrome | 20588305 | CNVD |
| Multiple myeloma | 16616336 | CNVD |
| Acute lymphoblastic leukemia | 21098271 | CNVD |
| Developmental delay | 19490664 | CNVD |
| Cancer | 21183584 | CNVD |
| Multiple Epiphyseal Dysplasia | 20877625 | CNVD |
| Congenital diaphragmatic hernia | 21085971 | CNVD |
| Glaucoma | 18694899 | CNVD |
| High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
| Prostate cancer | 16573809 | CNVD |
| Acute lymphoblastic leukemia | 21980252 | CNVD |
| Breast cancer | 17603634 | CNVD |
| Cancer | 20164920 | CNVD |
| Colorectal cancer | 21297112 | CNVD |
| Acute lymphoblastic leukemia | 22237106 | CNVD |
| Follicular lymphoma | 20505157 | CNVD |
| Glioblastoma multiforme | 21080181 | CNVD |
| Ewing''s sarcoma | 21437220 | CNVD |
| Basal cell lymphoma | 16317097 | CNVD |
| Diffuse large b-cell lymphoma | 16317097 | CNVD |
| Leukemia | 21518781 | CNVD |
| Cancer | 21637783 | CNVD |
| Facial dysmorphism | 22105932 | CNVD |
| Medulloblastoma | 21979893 | CNVD |
| Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
| Diffuse large b-cell lymphoma | 18287131 | CNVD |
| Esophageal squamous carcinoma | 21637470 | CNVD |
| Glioblastoma multiforme | 19960244 | CNVD |
| Hepatocellular carcinoma | 22174799 | CNVD |
| Endometrial cancer | 22040021 | CNVD |
| Acute myeloid leukemia | 16864856 | CNVD |
| Breast cancer | 21264507 | CNVD |
| Acute lymphoblastic leukemia | 20067559 | CNVD |
| Cancer | 16751803 | CNVD |
| Bladder cancer | 19088036 | CNVD |
| Wilms tumour | 21544195 | CNVD |
| Uveal melanoma | 21693616 | CNVD |
| Biliary cancer | 19435499 | CNVD |
| Malaria | 21533027 | CNVD |
| Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
| Autism | 22495311 | CNVD |
| small cell lung cancer | 20016488 | CNVD |
| Retinoblastoma | 19183342 | CNVD |
| Acute myeloid leukemia | 20729466 | CNVD |
| T-cell prolymphocytic leukemia | 19278963 | CNVD |
| Lung cancer | 18438408 | CNVD |
| Breast cancer | 20668451 | CNVD |
| Cancer | 20668451 | CNVD |
| Lung cancer | 20668451 | CNVD |
| Ovarian cancer | 20668451 | CNVD |
| Pancreas cancer | 20668451 | CNVD |
| Prostate cancer | 20668451 | CNVD |
| Thoracic aortic aneurysm | 21092924 | CNVD |
Chromatin state (count:0 , 50 per page) page:
| No data |
