Variant report

Variant	nsv970089
Chromosome Location	chr6:26868762-26872930
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 132 )
Associated
traits (count: 103 )

Variant overlapped rSNPs/rCNVs (count:132 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs372132262	chr6:26868777-26868778	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs62400845	chr6:26868858-26868859	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs370315561	chr6:26868862-26868863	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs3999369	chr6:26868896-26868897	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs555994185	chr6:26868919-26868920	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs62400846	chr6:26869010-26869011	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs367717710	chr6:26869029-26869030	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs201422895	chr6:26869091-26869092	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs3999371	chr6:26869115-26869116	Weak transcription	n/a	n/a	Overlapped CNVs	mRNA abundance
10	rs3999340	chr6:26869149-26869150	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs199927994	chr6:26869169-26869170	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs10080621	chr6:26869174-26869175	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs10080631	chr6:26869202-26869203	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs578049911	chr6:26869276-26869277	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs543751981	chr6:26869336-26869337	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs563541282	chr6:26869350-26869351	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs143086868	chr6:26869372-26869373	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs145178476	chr6:26869381-26869382	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs10080641	chr6:26869390-26869391	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs10080874	chr6:26869409-26869410	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs184627753	chr6:26869615-26869616	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs75985468	chr6:26869662-26869663	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs3996642	chr6:26869669-26869670	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs547300315	chr6:26869751-26869752	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs77842472	chr6:26869769-26869770	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs532896489	chr6:26869774-26869775	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs200440227	chr6:26869866-26869867	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs189894983	chr6:26869878-26869879	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs10080681	chr6:26869896-26869897	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs10080921	chr6:26869899-26869900	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs2984043	chr6:26869940-26869941	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs546442245	chr6:26870001-26870002	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs569716684	chr6:26870033-26870034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs139008111	chr6:26870034-26870035	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs3999345	chr6:26870035-26870036	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs3956871	chr6:26870083-26870084	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs566391408	chr6:26870095-26870096	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs535191482	chr6:26870102-26870103	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs9689526	chr6:26870119-26870120	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs578014247	chr6:26870180-26870181	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs543592371	chr6:26870196-26870197	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs3999346	chr6:26870203-26870204	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs556931652	chr6:26870208-26870209	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs573722772	chr6:26870217-26870218	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs541703673	chr6:26870218-26870219	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs561623820	chr6:26870233-26870234	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs568282137	chr6:26870242-26870243	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs527586417	chr6:26870243-26870244	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs541182461	chr6:26870255-26870256	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs377246689	chr6:26870358-26870359	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:103)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Gastric cancer	16891809	CNVD
Ovarian cancer	21781307	CNVD
Autism	21448237	CNVD
Cancer	20164919	CNVD
Melanoma	18172304	CNVD
Breast cancer	22844521	CNVD
HIV/AIDS	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ependymoma	19289631	CNVD
Gestational infection	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	17133270	CNVD
Autism	22495311	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Cancer	16790693	CNVD
Breast cancer	22032731	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21785460	CNVD
Retinoblastoma	16790693	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
T-cell lymphomas	19863542	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
small cell lung cancer	20016488	CNVD
Williams-beuren syndrome	16971481	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	21569311	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	21509527	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	21364760	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:26844400-26872000	Weak transcription	Fetal Intestine Small	intestine

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