Variant report

Variant	nsv970208
Chromosome Location	chr6:65863470-65866267
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 101 )
Associated
traits (count: 84 )

Variant overlapped rSNPs/rCNVs (count:101 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs78812121	chr6:65863480-65863481	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs12193660	chr6:65863493-65863494	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs575791200	chr6:65863513-65863514	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs189749501	chr6:65863543-65863544	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs372320755	chr6:65863584-65863585	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs564662616	chr6:65863594-65863595	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs533679282	chr6:65863596-65863597	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs540526974	chr6:65863634-65863635	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs559322989	chr6:65863655-65863656	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs143922752	chr6:65863677-65863678	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs181853316	chr6:65863678-65863679	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs76678131	chr6:65863698-65863699	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs185973688	chr6:65863744-65863745	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs190819121	chr6:65863769-65863770	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs151291063	chr6:65863770-65863771	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs570271707	chr6:65863780-65863781	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs183285921	chr6:65863785-65863786	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs552962017	chr6:65863808-65863809	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs566872034	chr6:65863822-65863823	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs535514069	chr6:65863832-65863833	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs555811969	chr6:65863907-65863908	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs567929701	chr6:65863938-65863939	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs555730921	chr6:65863993-65863994	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs375044210	chr6:65864009-65864010	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs375655500	chr6:65864103-65864104	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs575850538	chr6:65864122-65864123	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs535056657	chr6:65864137-65864138	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs558390431	chr6:65864149-65864150	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs80091280	chr6:65864153-65864154	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs540937427	chr6:65864166-65864167	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs560658185	chr6:65864194-65864195	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs368817934	chr6:65864220-65864221	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs529569831	chr6:65864237-65864238	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs34766028	chr6:65864252-65864253	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs541505830	chr6:65864342-65864343	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs115044225	chr6:65864400-65864401	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs578082289	chr6:65864428-65864429	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs184960447	chr6:65864452-65864453	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs550214875	chr6:65864495-65864496	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs570331591	chr6:65864506-65864507	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs78767385	chr6:65864550-65864551	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs534892937	chr6:65864572-65864573	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs4710513	chr6:65864576-65864577	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs150423174	chr6:65864589-65864590	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs566679606	chr6:65864633-65864634	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs535732783	chr6:65864663-65864664	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs138242392	chr6:65864705-65864706	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs557404230	chr6:65864788-65864789	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs191035248	chr6:65864802-65864803	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs538367057	chr6:65864812-65864813	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:84)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Colorectal cancer	16272173	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	21364760	CNVD
Prostate cancer	16573809	CNVD
Ovarian cancer	19835627	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Glioblastoma multiforme	22286061	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16272173	CNVD
Developmental delay	21147756	CNVD
small cell lung cancer	20016488	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Epilepsy	20502679	CNVD
Dyslexia	22102821	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Schizophrenia	23813976	CNVD
Bipolar disorder	19114987	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:65862600-65865200	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr6:65865200-65866800	Enhancers	Placenta Amnion	Placenta Amnion

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