Variant report

Variant	nsv970851
Chromosome Location	chr7:63020673-63029441
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 78 )
Associated
traits (count: 74 )

Variant overlapped rSNPs/rCNVs (count:78 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs560384160	chr7:63028008-63028009	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs148148076	chr7:63028013-63028014	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs532818536	chr7:63028026-63028027	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs544719503	chr7:63028037-63028038	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs1638879	chr7:63028039-63028040	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs189973936	chr7:63028061-63028062	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs530523952	chr7:63028110-63028111	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs550610918	chr7:63028113-63028114	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs567488237	chr7:63028114-63028115	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs529888257	chr7:63028127-63028128	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs546797172	chr7:63028130-63028131	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs181845561	chr7:63028138-63028139	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs368504966	chr7:63028139-63028140	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs538913732	chr7:63028156-63028157	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs552332869	chr7:63028164-63028165	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs569184206	chr7:63028172-63028173	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs186581539	chr7:63028177-63028178	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs554609187	chr7:63028179-63028180	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs2312368	chr7:63028180-63028181	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs534151259	chr7:63028187-63028188	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs553937328	chr7:63028190-63028191	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs62473972	chr7:63028422-63028423	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs62473973	chr7:63028446-63028447	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs539760542	chr7:63028506-63028507	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs111265860	chr7:63028548-63028549	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs113866693	chr7:63028577-63028578	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs556791072	chr7:63028604-63028605	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs576641593	chr7:63028628-63028629	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs544261865	chr7:63028629-63028630	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs560856525	chr7:63028632-63028633	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs574630224	chr7:63028637-63028638	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs112729964	chr7:63028690-63028691	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs373573425	chr7:63028791-63028792	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs567445947	chr7:63028792-63028793	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs200093974	chr7:63028800-63028801	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs560096337	chr7:63028831-63028832	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs532299335	chr7:63028867-63028868	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs561060462	chr7:63028872-63028873	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs536590382	chr7:63028886-63028887	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs552210021	chr7:63028899-63028900	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs562828121	chr7:63028909-63028910	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs549696304	chr7:63028920-63028921	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs531486450	chr7:63028924-63028925	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs113583080	chr7:63028998-63028999	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs548225323	chr7:63029007-63029008	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs568067589	chr7:63029019-63029020	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs7457579	chr7:63029065-63029066	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs370708950	chr7:63029087-63029088	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs527789443	chr7:63029094-63029095	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs183324593	chr7:63029120-63029121	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:74)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Follicular lymphoma	20505157	CNVD
Biliary cancer	19435499	CNVD
Williams-beuren syndrome	22470819	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Hepatocellular carcinoma	16750200	CNVD
Non-small cell lung cancer	21829676	CNVD
Gastric cancer	24379144	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Glioblastoma	21080181	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Breast cancer	21990379	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	21399695	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Astrocytoma	22246337	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
Acute monocytic leukemia	16498392	CNVD
Prostate cancer	16461572	CNVD
Salivary gland tumor	18059337	CNVD
Multiple myeloma	17550852	CNVD
Acute myeloid leukemia	21251322	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:63028000-63028200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr7:63028400-63030800	Weak transcription	Adipose Nuclei	Adipose

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