Variant report

Variant	nsv971377
Chromosome Location	chr7:61073087-61073587
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 65 )

Variant overlapped rSNPs/rCNVs (count:30 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs528310297	chr7:61073401-61073402	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs546858694	chr7:61073405-61073406	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs373323046	chr7:61073408-61073409	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs112927496	chr7:61073425-61073426	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs112408933	chr7:61073434-61073435	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs371229881	chr7:61073435-61073436	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs373727123	chr7:61073437-61073438	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs550322569	chr7:61073440-61073441	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs568934180	chr7:61073449-61073450	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs59875455	chr7:61073451-61073452	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs144342301	chr7:61073454-61073455	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs201239292	chr7:61073456-61073457	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs199529678	chr7:61073457-61073458	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs548344272	chr7:61073462-61073463	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs113190209	chr7:61073470-61073471	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs9718642	chr7:61073486-61073487	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs567841591	chr7:61073495-61073496	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs534932900	chr7:61073499-61073500	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs553602814	chr7:61073505-61073506	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs578198843	chr7:61073514-61073515	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs538981420	chr7:61073518-61073519	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs556938066	chr7:61073525-61073526	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs575283130	chr7:61073540-61073541	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs201802534	chr7:61073550-61073551	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs200195438	chr7:61073557-61073558	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs542704873	chr7:61073558-61073559	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs561079641	chr7:61073564-61073565	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs200670485	chr7:61073571-61073572	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs572681113	chr7:61073572-61073573	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs540077611	chr7:61073581-61073582	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:65)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Follicular lymphoma	20505157	CNVD
Biliary cancer	19435499	CNVD
Williams-beuren syndrome	22470819	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Hepatocellular carcinoma	16750200	CNVD
Non-small cell lung cancer	21829676	CNVD
Gastric cancer	24379144	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Hodgkin''s lymphoma	18641027	CNVD
small cell lung cancer	20016488	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Glioblastoma	21080181	CNVD
Autism	18414403	CNVD
Colorectal cancer	16272173	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	21364760	CNVD
Cancer	20164919	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:61073400-61079000	Weak transcription	Pancreatic Islets	Pancreatic Islet

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