Variant report

Variant	nsv971979
Chromosome Location	chr11:4510212-4511212
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 90 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:90 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs374489193	chr11:4510220-4510221	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs139285545	chr11:4510237-4510238	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs142595009	chr11:4510258-4510259	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs530624061	chr11:4510267-4510268	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs369816695	chr11:4510271-4510272	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs146030293	chr11:4510276-4510277	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs96489	chr11:4510285-4510286	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
8	rs367734782	chr11:4510286-4510287	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs200081615	chr11:4510287-4510288	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs369805748	chr11:4510291-4510292	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs187690082	chr11:4510292-4510293	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs142040619	chr11:4510327-4510328	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs145753082	chr11:4510336-4510337	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs568373516	chr11:4510337-4510338	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs138616789	chr11:4510342-4510343	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs200029336	chr11:4510343-4510344	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs376395151	chr11:4510357-4510358	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs568987040	chr11:4510365-4510366	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs201104279	chr11:4510366-4510367	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs139078347	chr11:4510375-4510376	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs537539173	chr11:4510404-4510405	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs202235407	chr11:4510418-4510419	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs147596013	chr11:4510430-4510431	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs370066776	chr11:4510436-4510437	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs141745573	chr11:4510487-4510488	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs147098497	chr11:4510490-4510491	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs147734448	chr11:4510493-4510494	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs200982565	chr11:4510500-4510501	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs368528167	chr11:4510501-4510502	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs372553031	chr11:4510527-4510528	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs375481739	chr11:4510536-4510537	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs141250648	chr11:4510537-4510538	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs185726722	chr11:4510538-4510539	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs201879394	chr11:4510547-4510548	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs3889581	chr11:4510553-4510554	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs148302381	chr11:4510564-4510565	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs201542937	chr11:4510581-4510582	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs331510	chr11:4510587-4510588	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs371666945	chr11:4510588-4510589	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs145681165	chr11:4510625-4510626	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs540224201	chr11:4510627-4510628	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs138371378	chr11:4510629-4510630	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs529182149	chr11:4510630-4510631	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs142554979	chr11:4510631-4510632	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs146003159	chr11:4510644-4510645	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs139948093	chr11:4510645-4510646	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs533004771	chr11:4510656-4510657	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs201805149	chr11:4510691-4510692	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs149330150	chr11:4510695-4510696	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs570619154	chr11:4510699-4510700	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Neuroblastoma	18923191	CNVD
Breast cancer	19432969	CNVD
Alzheimer''s disease	17576883	CNVD
Long-qt syndrome	17576883	CNVD
Emphysema	19352772	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Chordoma	18071362	CNVD
Breast cancer	16608533	CNVD
Cancer	21183584	CNVD
Gastric adenocarcinoma	19115996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Barrett''s syndrome	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Myelofibrosis	22110671	CNVD
Glioma	17123091	CNVD
Lung cancer	16773561	CNVD
Neuroblastoma	21124317	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Schizophrenia	21399695	CNVD
Gastric cancer	16891809	CNVD
Cancer	17160897	CNVD
Multiple myeloma	16616336	CNVD
small cell lung cancer	20016488	CNVD
Bipolar disorder	19114987	CNVD

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:4504200-4514000	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr11:4507800-4513800	Weak transcription	Primary monocytes fromperipheralblood	blood
3	chr11:4508400-4513600	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr11:4510600-4511000	Enhancers	Gastric	stomach

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