Variant report
Variant | nsv972041 |
---|---|
Chromosome Location | chr11:71330518-71615123 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:3987)
- CpG islands (count:3296)
- Chromatin interactive region (count:11)
- LncRNA region (count:29)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr11:71423994-71424313 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr11:71417122-71417426 | K562 | blood: | n/a | n/a |
3 | ARID3A | chr11:71416385-71416810 | K562 | blood: | n/a | n/a |
4 | ARID3A | chr11:71423449-71423649 | K562 | blood: | n/a | n/a |
5 | ARID3A | chr11:71511545-71511692 | K562 | blood: | n/a | n/a |
6 | ARID3A | chr11:71599388-71599657 | HepG2 | liver: | n/a | n/a |
7 | ARID3A | chr11:71460269-71460401 | K562 | blood: | n/a | n/a |
8 | ARID3A | chr11:71499570-71499575 | HepG2 | liver: | n/a | n/a |
9 | ARID3A | chr11:71475957-71476045 | K562 | blood: | n/a | n/a |
10 | ARID3A | chr11:71454526-71454806 | K562 | blood: | n/a | n/a |
11 | ARID3A | chr11:71410234-71410262 | K562 | blood: | n/a | n/a |
12 | ATF1 | chr11:71417251-71417305 | K562 | blood: | n/a | n/a |
13 | ATF1 | chr11:71475791-71476199 | K562 | blood: | n/a | n/a |
14 | ATF1 | chr11:71483232-71483430 | K562 | blood: | n/a | n/a |
15 | ATF1 | chr11:71575242-71575395 | K562 | blood: | n/a | n/a |
16 | ATF1 | chr11:71511476-71511666 | K562 | blood: | n/a | n/a |
17 | ATF1 | chr11:71454569-71454834 | K562 | blood: | n/a | n/a |
18 | ATF1 | chr11:71430611-71430715 | K562 | blood: | n/a | n/a |
19 | ATF2 | chr11:71540829-71541073 | GM12878 | blood: | n/a | n/a |
20 | ATF3 | chr11:71390992-71391254 | K562 | blood: | n/a | n/a |
21 | ATF3 | chr11:71416472-71416725 | K562 | blood: | n/a | n/a |
22 | ATF3 | chr11:71511455-71511719 | H1-hESC | embryonic stem cell: | n/a | n/a |
23 | ATF3 | chr11:71575077-71575386 | H1-hESC | embryonic stem cell: | n/a | n/a |
24 | ATF3 | chr11:71575100-71575329 | K562 | blood: | n/a | n/a |
25 | ATF3 | chr11:71511454-71511674 | GM12878 | blood: | n/a | n/a |
26 | BACH1 | chr11:71421452-71421711 | H1-hESC | embryonic stem cell: | n/a | n/a |
27 | BATF | chr11:71376144-71376697 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr11:71499485-71499773 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr11:71499406-71499609 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr11:71407057-71407555 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr11:71364018-71364247 | GM12878 | blood: | n/a | chr11:71364110-71364121 |
32 | BATF | chr11:71421930-71422331 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr11:71421908-71422351 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr11:71421266-71421667 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr11:71574985-71575313 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr11:71445512-71445867 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr11:71425014-71425933 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr11:71364307-71364538 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr11:71456494-71456680 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr11:71498902-71499183 | GM12878 | blood: | n/a | n/a |
41 | BATF | chr11:71524810-71525112 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr11:71575058-71575377 | GM12878 | blood: | n/a | n/a |
43 | BATF | chr11:71376106-71376750 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr11:71445516-71445843 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr11:71503748-71504008 | GM12878 | blood: | n/a | n/a |
46 | BATF | chr11:71428726-71429101 | GM12878 | blood: | n/a | chr11:71428919-71428927 |
47 | BATF | chr11:71457474-71457675 | GM12878 | blood: | n/a | n/a |
48 | BATF | chr11:71398779-71399009 | GM12878 | blood: | n/a | n/a |
49 | BATF | chr11:71532357-71532883 | GM12878 | blood: | n/a | n/a |
50 | BATF | chr11:71527794-71528002 | GM12878 | blood: | n/a | chr11:71527879-71527890 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:71597171-71597221 | HAEpiC | amniotic membrane: | n/a |
2 | chr11:71350975-71351025 | HNPCEpiC | eye: | n/a |
3 | chr11:71597171-71597221 | HAEpiC | amniotic membrane: | n/a |
4 | chr11:71350975-71351025 | HNPCEpiC | eye: | n/a |
5 | chr11:71524971-71525021 | PFSK-1 | brain: | n/a |
6 | chr11:71462149-71462199 | HCM | heart: | n/a |
7 | chr11:71524971-71525021 | AG04450 | lung: | fetal |
8 | chr11:71462582-71462632 | T-47D | breast: | n/a |
9 | chr11:71497552-71497602 | K562 | blood: | n/a |
10 | chr11:71340352-71340402 | SK-N-MC | brain: | n/a |
11 | chr11:71524734-71524784 | HNPCEpiC | eye: | n/a |
12 | chr11:71597171-71597221 | ProgFib | skin: | n/a |
13 | chr11:71524734-71524784 | HL-60 | blood: | n/a |
14 | chr11:71524500-71524550 | HIPEpiC | eye: | n/a |
15 | chr11:71340288-71340338 | SK-N-SH_RA | brain: | n/a |
16 | chr11:71524540-71524590 | HUVEC | blood vessel: | n/a |
17 | chr11:71524540-71524590 | HCPEpiC | choroid plexus: | n/a |
18 | chr11:71543583-71543633 | HCPEpiC | choroid plexus: | n/a |
19 | chr11:71417657-71417707 | AoSMC | blood vessel: | n/a |
20 | chr11:71600961-71601011 | GM12878 | blood: | n/a |
21 | chr11:71497552-71497602 | HepG2 | liver: | n/a |
22 | chr11:71350888-71350938 | NHBE | bronchial: | n/a |
23 | chr11:71485830-71485880 | GM12892 | blood: | n/a |
24 | chr11:71524500-71524550 | HRCEpiC | kidney: | n/a |
25 | chr11:71457160-71457210 | H1-hESC | embryonic stem cell: | embryo |
26 | chr11:71420485-71420535 | A549 | lung: | n/a |
27 | chr11:71497688-71497738 | MCF-7 | breast: | n/a |
28 | chr11:71597184-71597234 | AG04449 | skin: | fetal |
29 | chr11:71522461-71522511 | GM12892 | blood: | n/a |
30 | chr11:71346528-71346578 | ovcar-3 | ovarian: | n/a |
31 | chr11:71502816-71502866 | SKMC | muscle: | n/a |
32 | chr11:71456947-71456997 | Jurkat | blood: | n/a |
33 | chr11:71498202-71498252 | Hepatocyte | liver: | n/a |
34 | chr11:71545243-71545293 | IMR90 | lung: | fetal |
35 | chr11:71567175-71567225 | ovcar-3 | ovarian: | n/a |
36 | chr11:71524734-71524784 | RPTEC | kidney: | n/a |
37 | chr11:71350975-71351025 | BE2_C | brain: | n/a |
38 | chr11:71498715-71498765 | BE2_C | brain: | n/a |
39 | chr11:71346528-71346578 | BE2_C | brain: | n/a |
40 | chr11:71351271-71351321 | HPAEpiC | pulmonary alveolar: | n/a |
41 | chr11:71498609-71498659 | BE2_C | brain: | n/a |
42 | chr11:71597104-71597154 | CMK | blood: | n/a |
43 | chr11:71350888-71350938 | HL-60 | blood: | n/a |
44 | chr11:71417713-71417763 | NHBE | bronchial: | n/a |
45 | chr11:71524500-71524550 | HepG2 | liver: | n/a |
46 | chr11:71456947-71456997 | Hela-S3 | cervix: | n/a |
47 | chr11:71340352-71340402 | AG09319 | gingival: | n/a |
48 | chr11:71567175-71567225 | HEK293 | kidney: | embryo |
49 | chr11:71346528-71346578 | Jurkat | blood: | n/a |
50 | chr11:71497552-71497602 | MCF-7 | breast: | n/a |
(count:11 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:71499803..71501328-chr11:71502237..71504426,2 | K562 | blood: | |
2 | chr11:71349980..71350709-chr11:71511135..71512071,2 | K562 | blood: | |
3 | chr11:71499803..71501328-chr11:71502237..71504426,2 | K562 | blood: | |
4 | chr11:71489714..71493464-chr11:71497648..71499552,3 | MCF-7 | breast: | |
5 | chr11:71498340..71499087-chr19:18391666..18392636,2 | Hela-S3 | cervix: | |
6 | chr11:71502585..71504558-chr11:71523085..71525009,2 | MCF-7 | breast: | |
7 | chr11:71498143..71498944-chr16:5147397..5148064,2 | Hela-S3 | cervix: | |
8 | chr11:67572484..67573077-chr11:71498421..71498985,2 | HCT-116 | colon: | |
9 | chr11:71498107..71498639-chr3:75483883..75484386,2 | Hela-S3 | cervix: | |
10 | chr11:3442224..3443750-chr11:71497854..71499382,2 | MCF-7 | breast: | |
11 | chr11:71349980..71350709-chr11:71511135..71512071,2 | K562 | blood: |
(count:29 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-RP11-849H4.2.1-1 | chr11:71529199-71529284 | ENSG00000248671.3 |
2 | lnc-RP11-849H4.2.1-1 | chr11:71518637-71518702 | ENSG00000248671.3 |
3 | lnc-FAM86C1-3 | chr11:71394183-71394998 | expRegAs_chr11_7373_+ |
4 | lnc-DEFB108B-2 | chr11:71545758-71545904 | NONHSAT022717 |
5 | lnc-DEFB108B-1 | chr11:71580800-71580844 | XLOC_009200 |
6 | lnc-DEFB108B-2 | chr11:71548070-71548218 | NONHSAT022717 |
7 | lnc-RP11-849H4.2.1-1 | chr11:71527956-71528142 | ENSG00000248671.3 |
8 | lnc-DEFB108B-2 | chr11:71548445-71548756 | NONHSAT022717 |
9 | lnc-AP000867.1-2 | chr11:71383721-71384047 | ENSG00000254504.1 |
10 | lnc-DEFB108B-1 | chr11:71595455-71595604 | NONHSAT022724 |
11 | lnc-FAM86C1-1 | chr11:71422786-71422863 | NONHSAT022701 |
12 | lnc-FAM86C1-1 | chr11:71425421-71425604 | NONHSAT022701 |
13 | lnc-NUMA1-1 | chr11:71581076-71581470 | XLOC_009494 |
14 | lnc-FAM86C1-4 | chr11:71393417-71393825 | expRegAs_chr11_7370_+ |
15 | lnc-AP000867.1-1 | chr11:71415223-71415306 | ENSG00000254972 |
16 | lnc-DEFB108B-1 | chr11:71578414-71578614 | XLOC_009200 |
17 | lnc-DEFB108B-1 | chr11:71595453-71596531 | XLOC_009200 |
18 | lnc-RP11-849H4.2.1-1 | chr11:71524389-71524529 | NONHSAT022713 |
19 | lnc-AP000867.1-2 | chr11:71421533-71421627 | ENSG00000254504.1 |
20 | lnc-AP000867.1-1 | chr11:71416406-71416450 | ENSG00000254972 |
21 | lnc-RP11-849H4.2.1-1 | chr11:71517696-71518702 | NONHSAT022713 |
22 | lnc-FAM86C1-2 | chr11:71395710-71396117 | expRegAs_chr11_7374_+ |
23 | lnc-AP000867.1-1 | chr11:71412314-71412531 | ENSG00000254972 |
24 | lnc-DEFB108B-1 | chr11:71589499-71589564 | NONHSAT022724 |
25 | lnc-FAM86C1-1 | chr11:71433219-71433273 | NONHSAT022701 |
26 | lnc-NUMA1-1 | chr11:71589418-71589551 | XLOC_009494 |
27 | lnc-AP000867.1-4 | chr11:71401499-71401703 | NONHSAT022697 |
28 | lnc-FAM86C1-5 | chr11:71392883-71393202 | expRegAs_chr11_7367_+ |
29 | lnc-RNF121-6 | chr11:71612764-71612976 | expReg_chr11_7433_+ |
No data |
No data |
Variant related genes | Relation type |
---|---|
DEFB108B | TF binding region |
FAM86C1 | TF binding region |
OR7E128P | TF binding region |
OR7E4P | TF binding region |
ENSG00000255415 | TF binding region |
ENSG00000225805 | TF binding region |
ENSG00000248671 | TF binding region |
ENSG00000266859 | TF binding region |
ZNF705E | TF binding region |
ENSG00000255157 | TF binding region |
ENSG00000223235 | TF binding region |
ENSG00000264091 | TF binding region |
ENSG00000254805 | TF binding region |
ALG1L9P | TF binding region |
ENPP7P8 | TF binding region |
ENSG00000254972 | TF binding region |
RNA5SP342 | TF binding region |
OR7E126P | TF binding region |
ENSG00000221458 | TF binding region |
RPS3AP41 | TF binding region |
DEFB108B | CpG island |
FAM86C1 | CpG island |
OR7E128P | CpG island |
OR7E4P | CpG island |
ENSG00000255415 | CpG island |
ENSG00000225805 | CpG island |
ENSG00000248671 | CpG island |
ENSG00000266859 | CpG island |
ZNF705E | CpG island |
ENSG00000255157 | CpG island |
ENSG00000223235 | CpG island |
ENSG00000264091 | CpG island |
ENSG00000254805 | CpG island |
ALG1L9P | CpG island |
ENPP7P8 | CpG island |
ENSG00000254972 | CpG island |
RNA5SP342 | CpG island |
OR7E126P | CpG island |
ENSG00000221458 | CpG island |
RPS3AP41 | CpG island |
ENSG00000158483 | chromatin interactions |
ENSG00000118894 | chromatin interactions |
ENSG00000166492 | chromatin interactions |
ENSG00000160172 | chromatin interactions |
ENSG00000248671 | chromatin interactions |
ENSG00000130522 | chromatin interactions |
ENSG00000244026 | chromatin interactions |
OR11A1 | miRNA target sites |
KIAA1217 | miRNA target sites |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs79239918 | chr11:71335241-71335242 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs575638204 | chr11:71335248-71335249 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs542755009 | chr11:71335268-71335269 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs373346983 | chr11:71335283-71335284 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs572914740 | chr11:71335284-71335285 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs79788829 | chr11:71335292-71335293 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs6592248 | chr11:71335294-71335295 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
8 | rs565128575 | chr11:71335295-71335296 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs111938595 | chr11:71335320-71335321 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs532457160 | chr11:71335369-71335370 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs550933597 | chr11:71335402-71335403 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs138931017 | chr11:71335465-71335466 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs529720967 | chr11:71335479-71335480 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs547962448 | chr11:71335485-71335486 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs568476199 | chr11:71335529-71335530 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs534862188 | chr11:71335538-71335539 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs149018731 | chr11:71335542-71335543 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs28859366 | chr11:71335563-71335564 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
19 | rs538939910 | chr11:71335592-71335593 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs557685126 | chr11:71335649-71335650 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs569138631 | chr11:71335657-71335658 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs547888862 | chr11:71335676-71335677 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs187129032 | chr11:71335678-71335679 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs10898390 | chr11:71335695-71335696 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
25 | rs573376061 | chr11:71335703-71335704 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs147264484 | chr11:71335732-71335733 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs189006676 | chr11:71335786-71335787 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs28849968 | chr11:71335820-71335821 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs540912423 | chr11:71335850-71335851 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs562296025 | chr11:71335871-71335872 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs530560770 | chr11:71335885-71335886 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs370437221 | chr11:71335889-71335890 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs544495677 | chr11:71335895-71335896 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs181990155 | chr11:71335904-71335905 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs60667648 | chr11:71335913-71335914 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
36 | rs141403193 | chr11:71335914-71335915 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs559946276 | chr11:71335935-71335936 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs186327673 | chr11:71336022-71336023 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs150837119 | chr11:71336031-71336032 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs530446548 | chr11:71336042-71336043 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs552117143 | chr11:71336043-71336044 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs571506133 | chr11:71336056-71336057 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs189885062 | chr11:71336075-71336076 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs550955186 | chr11:71336076-71336077 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs569553827 | chr11:71336094-71336095 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs182104551 | chr11:71336098-71336099 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs554956285 | chr11:71336104-71336105 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs28516412 | chr11:71336123-71336124 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
49 | rs534283737 | chr11:71336129-71336130 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs559122200 | chr11:71336132-71336133 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Medulloblastoma | 21979893 | CNVD |
Gastric cancer | 17908304 | CNVD |
Multiple myeloma | 20724749 | CNVD |
Wilms tumour | 21544195 | CNVD |
Autism | 22495311 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Non-small cell lung cancer | 21385341 | CNVD |
Intellectual disability | 22102821 | CNVD |
Glioblastoma multiforme | 21138945 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Cancer | 21637783 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Chronic lymphocytic leukemia | 21795749 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Neuroblastoma | 21484798 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 20837533 | CNVD |
Breast cancer | 21264507 | CNVD |
Cervical cancer | 21063398 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Liposarcoma | 21253554 | CNVD |
Neuroblastoma | 18923524 | CNVD |
Neuroblastoma | 18664255 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Multiple myeloma | 17077331 | CNVD |
Neuroblastoma | 17533364 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Lung cancer | 18438408 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Prostate cancer | 18632612 | CNVD |
Smith-Lemli-Opitz syndrome | 21572526 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Multiple myeloma | 16461302 | CNVD |
Cancer | 16751803 | CNVD |
Seminomas | 18059402 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Chordoma | 21602918 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Melanoma | 18172304 | CNVD |
Breast cancer | 21806811 | CNVD |
Breast cancer | 22002566 | CNVD |
Ductal carcinoma | 18381933 | CNVD |
Retinoblastoma | 22278416 | CNVD |
Breast cancer | 20953835 | CNVD |
oto-dental syndrome | 17656375 | CNVD |
Asthma | 21956041 | CNVD |
Breast cancer | 17603634 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Non-small cell lung cancer | 20864512 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Cervical cancer | 21062161 | CNVD |
Breast cancer | 21509527 | CNVD |
Breast cancer | 17001317 | CNVD |
Oral squamous cell carcinoma | 16619035 | CNVD |
Intracranial aneurysm | 16715129 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Primary mediastinal b-cell lymphoma | 17728785 | CNVD |
Esophageal adenocarcinoma | 18820669 | CNVD |
Colorectal cancer | 16882699 | CNVD |
Berardinelli-seip congenital generalized lipodystrophy | 17668395 | CNVD |
Spinal muscular atrophy | 17668395 | CNVD |
Neonatal seizures | 17668395 | CNVD |
Neonatal seizures | 17668391 | CNVD |
Neuroticism | 17667963 | CNVD |
Cancer | 17916600 | CNVD |
Squamous cell cancer | 19047905 | CNVD |
Multiple endocrine neoplasia type 1 | 19566914 | CNVD |
XY sex reversal | 17503084 | CNVD |
Berardinelli-seip congenital generalized lipodystrophy | 17668391 | CNVD |
Maculopathy | 17646752 | CNVD |
Breast cancer | 17899364 | CNVD |
Breast cancer | 17157792 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Cancer | 20164919 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Breast cancer | 21364760 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Ovarian clear cell carcinoma | 19293255 | CNVD |
Cancer | 22183965 | CNVD |
Melanoma | 22183965 | CNVD |
Esophageal squamous carcinoma | 18405350 | CNVD |
Breast cancer | 16620391 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Neuroblastoma | 18923191 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Chronic lymphocytic leukemia | 22228453 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Urothelial cell carcinoma | 18451213 | CNVD |
Leukoplakia | 24403051 | CNVD |
Prostate cancer | 17217626 | CNVD |
Cancer | 22429812 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Breast cancer | 22522925 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Breast cancer | 17142309 | CNVD |
Ovarian cancer | 21781307 | CNVD |
Cancer | 17440070 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr11:71335200-71350400 | Weak transcription | Right Atrium | heart |
2 | chr11:71336800-71337000 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
3 | chr11:71338600-71339000 | Enhancers | Duodenum Mucosa | Duodenum |
4 | chr11:71344200-71350600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
5 | chr11:71346800-71347000 | Bivalent Enhancer | Foreskin Fibroblast Primary Cells skin01 | Skin |
6 | chr11:71350000-71350200 | Bivalent Enhancer | Primary T helper cells PMA-I stimulated | -- |
7 | chr11:71350000-71350400 | Enhancers | H9 Cell Line | embryonic stem cell |
8 | chr11:71350000-71350400 | Bivalent Enhancer | Breast Myoepithelial Primary Cells | Breast |
9 | chr11:71350000-71350400 | Bivalent Enhancer | Primary T cells fromperipheralblood | blood |
10 | chr11:71350000-71350400 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
11 | chr11:71350000-71350400 | Bivalent Enhancer | Primary T regulatory cells fromperipheralblood | blood |
12 | chr11:71350000-71350400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
13 | chr11:71350000-71350400 | Bivalent Enhancer | Duodenum Mucosa | Duodenum |
14 | chr11:71350000-71350400 | Bivalent Enhancer | Fetal Muscle Leg | muscle |
15 | chr11:71350000-71350600 | Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
16 | chr11:71350000-71350600 | Enhancers | Primary B cells from peripheral blood | blood |
17 | chr11:71350000-71350600 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
18 | chr11:71350000-71350600 | Bivalent Enhancer | Primary T killer naive cells fromperipheralblood | blood |
19 | chr11:71350000-71350800 | Enhancers | Primary B cells from cord blood | blood |
20 | chr11:71350000-71351400 | Bivalent/Poised TSS | iPS-15b Cell Line | embryonic stem cell |
21 | chr11:71350200-71350400 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
22 | chr11:71350200-71350400 | Enhancers | Primary T helper cells fromperipheralblood | blood |
23 | chr11:71350200-71350400 | Bivalent Enhancer | Foreskin Keratinocyte Primary Cells skin03 | Skin |
24 | chr11:71350200-71350400 | Bivalent Enhancer | Foreskin Melanocyte Primary Cells skin01 | Skin |
25 | chr11:71350200-71350400 | Enhancers | Fetal Intestine Small | intestine |
26 | chr11:71350200-71350400 | Enhancers | Right Ventricle | heart |
27 | chr11:71350200-71350600 | Bivalent/Poised TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
28 | chr11:71350200-71350800 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
29 | chr11:71350200-71350800 | Active TSS | Fetal Brain Female | brain |
30 | chr11:71350200-71350800 | Enhancers | Spleen | Spleen |
31 | chr11:71350200-71351200 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
32 | chr11:71350400-71350600 | Active TSS | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
33 | chr11:71350400-71350600 | Bivalent/Poised TSS | iPS DF 19.11 Cell Line | embryonic stem cell |
34 | chr11:71350400-71350600 | Active TSS | Primary T helper 17 cells PMA-I stimulated | -- |
35 | chr11:71350400-71350600 | Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
36 | chr11:71350400-71350600 | Active TSS | Muscle Satellite Cultured Cells | -- |
37 | chr11:71350400-71350600 | Active TSS | Adipose Nuclei | Adipose |
38 | chr11:71350400-71350600 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
39 | chr11:71350400-71350600 | Bivalent/Poised TSS | Colonic Mucosa | Colon |
40 | chr11:71350400-71350600 | Bivalent/Poised TSS | Duodenum Mucosa | Duodenum |
41 | chr11:71350400-71350600 | Active TSS | Esophagus | oesophagus |
42 | chr11:71350400-71350600 | Bivalent/Poised TSS | Fetal Adrenal Gland | Adrenal Gland |
43 | chr11:71350400-71350600 | Bivalent/Poised TSS | Fetal Muscle Leg | muscle |
44 | chr11:71350400-71350600 | Bivalent/Poised TSS | Placenta | Placenta |
45 | chr11:71350400-71350600 | Active TSS | Pancreas | Pancrea |
46 | chr11:71350400-71350600 | Active TSS | Placenta Amnion | Placenta Amnion |
47 | chr11:71350400-71350600 | Active TSS | Rectal Mucosa Donor 31 | rectum |
48 | chr11:71350400-71350600 | Bivalent/Poised TSS | Skeletal Muscle Male | skeletal muscle |
49 | chr11:71350400-71350600 | Bivalent/Poised TSS | Skeletal Muscle Female | skeletal muscle |
50 | chr11:71350400-71350800 | Active TSS | ES-WA7 Cell Line | embryonic stem cell |