Variant report

Variant	nsv972270
Chromosome Location	chr9:73794815-73798020
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 126 )
Associated
traits (count: 57 )

Variant overlapped rSNPs/rCNVs (count:126 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs546522695	chr9:73794851-73794852	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs370720664	chr9:73794859-73794860	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs564629229	chr9:73794869-73794870	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs528744270	chr9:73794873-73794874	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs540488032	chr9:73794961-73794962	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs35877663	chr9:73794967-73794968	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs182152904	chr9:73794999-73795000	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs537667416	chr9:73795024-73795025	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs551078712	chr9:73795063-73795064	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs569313485	chr9:73795064-73795065	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs377484847	chr9:73795084-73795085	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs371140112	chr9:73795105-73795106	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs199961433	chr9:73795111-73795112	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs187941149	chr9:73795122-73795123	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs551704649	chr9:73795143-73795144	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs566661548	chr9:73795176-73795177	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs528122509	chr9:73795301-73795302	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs145374237	chr9:73795308-73795309	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs555171994	chr9:73795309-73795310	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs567110340	chr9:73795338-73795339	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs568299712	chr9:73795371-73795372	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs62546792	chr9:73795427-73795428	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs555840183	chr9:73795448-73795449	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs374865503	chr9:73795464-73795465	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs112145899	chr9:73795473-73795474	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs539440523	chr9:73795495-73795496	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs553694694	chr9:73795526-73795527	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs118095071	chr9:73795537-73795538	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs540906024	chr9:73795565-73795566	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs562302664	chr9:73795640-73795641	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs192360429	chr9:73795642-73795643	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs184037642	chr9:73795686-73795687	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs550732822	chr9:73795704-73795705	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs533422975	chr9:73795717-73795718	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs551498691	chr9:73795760-73795761	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs367610379	chr9:73795843-73795844	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs375103250	chr9:73795847-73795848	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs566838756	chr9:73795857-73795858	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs188544223	chr9:73795866-73795867	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs570644759	chr9:73795902-73795903	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs548858131	chr9:73795917-73795918	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs36118202	chr9:73795920-73795921	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs567173171	chr9:73795929-73795930	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs537654053	chr9:73795974-73795975	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs549524500	chr9:73795990-73795991	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs370699213	chr9:73796018-73796019	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs571271818	chr9:73796073-73796074	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs556155477	chr9:73796085-73796086	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs142228662	chr9:73796095-73796096	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs371558453	chr9:73796100-73796101	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:57)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	20729466	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Oral cancer	21386901	CNVD
Epilepsy	22083797	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Bipolar disorder	18458673	CNVD
Malignant melanoma	17260012	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73794200-73797800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr9:73794600-73797600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr9:73797600-73798000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr9:73797800-73799400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr9:73798000-73798400	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr9:73798000-73798400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr9:73798000-73799000	Enhancers	Primary hematopoietic stem cells	blood

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