Variant report

Variant	nsv972445
Chromosome Location	chr9:118189841-118193124
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 138 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:138 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs550552799	chr9:118189859-118189860	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs532666937	chr9:118189868-118189869	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs536527488	chr9:118189909-118189910	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs553664036	chr9:118189981-118189982	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs567071671	chr9:118189984-118189985	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs7029620	chr9:118190043-118190044	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs190017316	chr9:118190049-118190050	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs575400495	chr9:118190079-118190080	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs544367033	chr9:118190095-118190096	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs34690192	chr9:118190101-118190102	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs193193383	chr9:118190109-118190110	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs530311848	chr9:118190112-118190113	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs539861376	chr9:118190144-118190145	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs560369154	chr9:118190150-118190151	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs184311063	chr9:118190158-118190159	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs138726357	chr9:118190196-118190197	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs10817765	chr9:118190201-118190202	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs141988187	chr9:118190247-118190248	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs10817766	chr9:118190260-118190261	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs188646036	chr9:118190300-118190301	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs530076110	chr9:118190316-118190317	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs62577531	chr9:118190319-118190320	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs567112860	chr9:118190328-118190329	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs368182650	chr9:118190344-118190345	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs539004241	chr9:118190365-118190366	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs36133735	chr9:118190385-118190386	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs36164770	chr9:118190397-118190398	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs569497798	chr9:118190415-118190416	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs11791035	chr9:118190416-118190417	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs11788962	chr9:118190417-118190418	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs182770647	chr9:118190423-118190424	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs537922848	chr9:118190450-118190451	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs9409152	chr9:118190453-118190454	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs554669816	chr9:118190487-118190488	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs10817767	chr9:118190615-118190616	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs12343652	chr9:118190662-118190663	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs10982739	chr9:118190693-118190694	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs533737871	chr9:118190715-118190716	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs376807759	chr9:118190776-118190777	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs369522367	chr9:118190805-118190806	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs373758234	chr9:118190835-118190836	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs375225547	chr9:118190860-118190861	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs553500363	chr9:118190862-118190863	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs369048876	chr9:118190887-118190888	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs373777463	chr9:118190901-118190902	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs10982740	chr9:118190977-118190978	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs548369146	chr9:118191071-118191072	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs181150287	chr9:118191091-118191092	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs113459685	chr9:118191092-118191093	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs545825318	chr9:118191094-118191095	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
small cell lung cancer	20016488	CNVD
Cardiac fibroma	18329553	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Testicular germ cell tumor	18059402	CNVD
Breast cancer	21364760	CNVD
Developmental delay	21147756	CNVD
Lung cancer	19147751	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16272173	CNVD
Bladder cancer	21909424	CNVD
Breast cancer	21509527	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Cervical cancer	16585170	CNVD
Ependymoma	19289631	CNVD
Schizophrenia	18940311	CNVD
Neuroticism	17667963	CNVD
Cervical cancer	17311676	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Neurodevelopmental disorder	0	CNVD
Amyotrophic lateral sclerosis	20685689	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:118189400-118193600	Weak transcription	Fetal Kidney	kidney
2	chr9:118192800-118208000	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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