Variant report

Variant	nsv972763
Chromosome Location	chr9:84532014-84533110
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM75D1-5	chr9:84530307-84534842	NR_026851

Extended variants
information (count: 83 )
Associated
traits (count: 66 )

Variant overlapped rSNPs/rCNVs (count:83 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs558427780	chr9:84532027-84532028	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
2	rs576617766	chr9:84532095-84532096	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
3	rs370988657	chr9:84532096-84532097	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
4	rs556025796	chr9:84532099-84532100	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
5	rs370722761	chr9:84532113-84532114	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
6	rs573794072	chr9:84532117-84532118	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
7	rs139482027	chr9:84532128-84532129	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
8	rs559615812	chr9:84532131-84532132	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
9	rs544235115	chr9:84532132-84532133	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
10	rs551427336	chr9:84532144-84532145	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
11	rs563608636	chr9:84532145-84532146	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
12	rs530671473	chr9:84532161-84532162	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
13	rs200046676	chr9:84532162-84532163	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
14	rs568081715	chr9:84532165-84532166	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
15	rs368765774	chr9:84532171-84532172	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
16	rs201038991	chr9:84532177-84532178	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
17	rs513556	chr9:84532199-84532200	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
18	rs370587558	chr9:84532202-84532203	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
19	rs539651438	chr9:84532206-84532207	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
20	rs184997714	chr9:84532210-84532211	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
21	rs188680624	chr9:84532214-84532215	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
22	rs200195928	chr9:84532223-84532224	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
23	rs537310215	chr9:84532258-84532259	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
24	rs149690440	chr9:84532265-84532266	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
25	rs573656225	chr9:84532292-84532293	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
26	rs181421082	chr9:84532311-84532312	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
27	rs184134421	chr9:84532345-84532346	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
28	rs371854871	chr9:84532360-84532361	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
29	rs559782718	chr9:84532368-84532369	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
30	rs563312113	chr9:84532383-84532384	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
31	rs530849947	chr9:84532430-84532431	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
32	rs188414135	chr9:84532438-84532439	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
33	rs369710394	chr9:84532469-84532470	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
34	rs147799231	chr9:84532472-84532473	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
35	rs529250301	chr9:84532496-84532497	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
36	rs547529113	chr9:84532497-84532498	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
37	rs372381900	chr9:84532507-84532508	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
38	rs565836075	chr9:84532515-84532516	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
39	rs533238593	chr9:84532518-84532519	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
40	rs551965322	chr9:84532519-84532520	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
41	rs570133222	chr9:84532522-84532523	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
42	rs542411246	chr9:84532523-84532524	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
43	rs545235168	chr9:84532539-84532540	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
44	rs201108076	chr9:84532562-84532563	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
45	rs180781393	chr9:84532604-84532605	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
46	rs187563540	chr9:84532606-84532607	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
47	rs552958615	chr9:84532625-84532626	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
48	rs114591902	chr9:84532632-84532633	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
49	rs544745240	chr9:84532633-84532634	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
50	rs375929629	chr9:84532653-84532654	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a

Variant related diseases (count:66)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Bipolar disorder	18458673	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Urothelial cell carcinoma	18451213	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Renal cell carcinoma	18765545	CNVD
Astrocytoma	22246337	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Epilepsy	20502679	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:0 , 50 per page) page:

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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