Variant report

Variant	nsv973274
Chromosome Location	chr9:44056831-44058766
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 72 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:72 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs549530150	chr9:44057234-44057235	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs200277147	chr9:44057244-44057245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs201054468	chr9:44057262-44057263	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs538723266	chr9:44057273-44057274	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs553782065	chr9:44057302-44057303	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs4031759	chr9:44057312-44057313	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs4031760	chr9:44057313-44057314	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs572766073	chr9:44057333-44057334	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs187292841	chr9:44057352-44057353	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs372225075	chr9:44057365-44057366	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs146243940	chr9:44057408-44057409	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs138099558	chr9:44057409-44057410	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs142676408	chr9:44057416-44057417	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs4031761	chr9:44057431-44057432	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs537322994	chr9:44057460-44057461	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs146296338	chr9:44057462-44057463	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs559168424	chr9:44057478-44057479	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs77523686	chr9:44057479-44057480	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs577841468	chr9:44057605-44057606	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs545110328	chr9:44057613-44057614	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs559933820	chr9:44057650-44057651	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs191969952	chr9:44057660-44057661	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs377223332	chr9:44057690-44057691	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs542217119	chr9:44057759-44057760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs148521027	chr9:44057822-44057823	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs575911116	chr9:44057866-44057867	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs531473162	chr9:44057873-44057874	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs549591531	chr9:44057886-44057887	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs571092424	chr9:44057912-44057913	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs532507773	chr9:44057915-44057916	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs538253330	chr9:44057916-44057917	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs547863991	chr9:44057933-44057934	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs62536295	chr9:44057943-44057944	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs62536296	chr9:44058050-44058051	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs548256462	chr9:44058057-44058058	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs570350784	chr9:44058058-44058059	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs571800846	chr9:44058078-44058079	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs62536297	chr9:44058088-44058089	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
39	rs559231036	chr9:44058139-44058140	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs146881459	chr9:44058140-44058141	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs577504160	chr9:44058141-44058142	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs538786121	chr9:44058149-44058150	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs553839802	chr9:44058151-44058152	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs572011282	chr9:44058161-44058162	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs542629739	chr9:44058168-44058169	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs560699301	chr9:44058182-44058183	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs575963716	chr9:44058188-44058189	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs543301136	chr9:44058220-44058221	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs560907196	chr9:44058291-44058292	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs564782422	chr9:44058300-44058301	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Melanoma	18172304	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Oral cancer	21386901	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21509527	CNVD
Sezary syndrome	18413736	CNVD
early-passage human iPS cells	21368824	CNVD
Schizophrenia	21346763	CNVD
Breast cancer	21990379	CNVD
Astrocytoma	22246337	CNVD
Lung adenocarcinoma	17086460	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Lung cancer	17086460	CNVD
Rhabdomyosarcoma	16790082	CNVD
Breast cancer	22522925	CNVD
Schizophrenia	20967226	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:44057200-44070600	Weak transcription	Liver	Liver

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