Variant report

Variant	nsv973276
Chromosome Location	chr9:44082657-44086935
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 190 )
Associated
traits (count: 67 )

Variant overlapped rSNPs/rCNVs (count:190 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs550883936	chr9:44082705-44082706	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs377470247	chr9:44082715-44082716	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs574726587	chr9:44082726-44082727	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs184495184	chr9:44082727-44082728	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs556974608	chr9:44082764-44082765	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs112035153	chr9:44082789-44082790	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs112618268	chr9:44082793-44082794	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs370991135	chr9:44082807-44082808	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs111823041	chr9:44082928-44082929	Weak transcription	n/a	n/a	Overlapped CNVs	mRNA abundance
10	rs545916275	chr9:44082945-44082946	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs564706973	chr9:44082946-44082947	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs576975852	chr9:44082987-44082988	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs367667146	chr9:44083003-44083004	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs371019857	chr9:44083014-44083015	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs74652949	chr9:44083038-44083039	Weak transcription	n/a	n/a	Overlapped CNVs	mRNA abundance
16	rs559384064	chr9:44083064-44083065	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs182291119	chr9:44083079-44083080	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs565759632	chr9:44083100-44083101	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs548193143	chr9:44083115-44083116	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs563298971	chr9:44083183-44083184	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs62537415	chr9:44083214-44083215	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs62537416	chr9:44083238-44083239	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs552317147	chr9:44083349-44083350	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs570983384	chr9:44083371-44083372	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs528678195	chr9:44083404-44083405	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs547215244	chr9:44083438-44083439	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs568648143	chr9:44083476-44083477	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs201547619	chr9:44083509-44083510	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs534454811	chr9:44083519-44083520	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs535778614	chr9:44083660-44083661	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs556911153	chr9:44083665-44083666	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs568928820	chr9:44083673-44083674	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs539509774	chr9:44083709-44083710	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs557976228	chr9:44083719-44083720	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs373984383	chr9:44083770-44083771	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs62537417	chr9:44083789-44083790	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs540860075	chr9:44083792-44083793	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs201450396	chr9:44083793-44083794	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs375654864	chr9:44083816-44083817	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs574763989	chr9:44083829-44083830	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs369834941	chr9:44083844-44083845	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs372641062	chr9:44083854-44083855	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs542166731	chr9:44083860-44083861	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs563239900	chr9:44083869-44083870	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs554728129	chr9:44083876-44083877	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs199804417	chr9:44083888-44083889	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs200394388	chr9:44083895-44083896	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs574571701	chr9:44083910-44083911	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs543708275	chr9:44083959-44083960	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs62538264	chr9:44083963-44083964	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:67)

Disease	PMID	Source
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Melanoma	18172304	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Oral cancer	21386901	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21509527	CNVD
Sezary syndrome	18413736	CNVD
early-passage human iPS cells	21368824	CNVD
Schizophrenia	21346763	CNVD
Breast cancer	21990379	CNVD
Astrocytoma	22246337	CNVD
Lung adenocarcinoma	17086460	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Lung cancer	17086460	CNVD
Rhabdomyosarcoma	16790082	CNVD
Schizophrenia	20967226	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:44071000-44092000	Weak transcription	Liver	Liver

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