Variant report

Variant	nsv973278
Chromosome Location	chr9:44095961-44098042
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 105 )
Associated
traits (count: 67 )

Variant overlapped rSNPs/rCNVs (count:105 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs562757752	chr9:44095990-44095991	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs377462456	chr9:44095994-44095995	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs201162275	chr9:44096019-44096020	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs533427206	chr9:44096024-44096025	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs369139686	chr9:44096047-44096048	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs567020064	chr9:44096088-44096089	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs528282634	chr9:44096111-44096112	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs144689398	chr9:44096157-44096158	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs181982791	chr9:44096164-44096165	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs372676094	chr9:44096165-44096166	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs113655351	chr9:44096177-44096178	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs556880890	chr9:44096193-44096194	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs186320867	chr9:44096204-44096205	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs148524604	chr9:44096218-44096219	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs189887345	chr9:44096219-44096220	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs112977729	chr9:44096220-44096221	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs534105413	chr9:44096224-44096225	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs182365338	chr9:44096234-44096235	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs574241484	chr9:44096257-44096258	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs544590309	chr9:44096264-44096265	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs188453656	chr9:44096272-44096273	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs147298799	chr9:44096278-44096279	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs62538295	chr9:44096292-44096293	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
24	rs560549943	chr9:44096300-44096301	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs375328327	chr9:44096318-44096319	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs112011408	chr9:44096323-44096324	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs78524368	chr9:44096335-44096336	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs561748249	chr9:44096338-44096339	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs529145882	chr9:44096341-44096342	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs550602704	chr9:44096347-44096348	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs191146058	chr9:44096356-44096357	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs183810518	chr9:44096379-44096380	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs550990417	chr9:44096386-44096387	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs377609879	chr9:44096527-44096528	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs71493017	chr9:44096617-44096618	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs555890663	chr9:44096633-44096634	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs375496052	chr9:44096654-44096655	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs76678956	chr9:44096696-44096697	Weak transcription	n/a	n/a	Overlapped CNVs	mRNA abundance
39	rs78800764	chr9:44096774-44096775	Weak transcription	n/a	n/a	Overlapped CNVs	mRNA abundance
40	rs62538296	chr9:44096775-44096776	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs191979039	chr9:44096793-44096794	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs71493018	chr9:44096814-44096815	Weak transcription	n/a	n/a	Overlapped CNVs	mRNA abundance
43	rs149053250	chr9:44096821-44096822	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs199510191	chr9:44096838-44096839	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs572536953	chr9:44096867-44096868	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs542763202	chr9:44096869-44096870	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs199910215	chr9:44096954-44096955	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs200861456	chr9:44096980-44096981	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs201996556	chr9:44096983-44096984	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs199688296	chr9:44096984-44096985	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:67)

Disease	PMID	Source
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Melanoma	18172304	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Oral cancer	21386901	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21509527	CNVD
Sezary syndrome	18413736	CNVD
early-passage human iPS cells	21368824	CNVD
Schizophrenia	21346763	CNVD
Breast cancer	21990379	CNVD
Astrocytoma	22246337	CNVD
Lung adenocarcinoma	17086460	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Lung cancer	17086460	CNVD
Rhabdomyosarcoma	16790082	CNVD
Schizophrenia	20967226	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:44093400-44109800	Weak transcription	Liver	Liver

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