Variant report
Variant | nsv973383 |
---|---|
Chromosome Location | chr9:141083364-141088744 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs112878636 | chr9:141087405-141087406 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
2 | rs112829917 | chr9:141087412-141087413 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
3 | rs76195414 | chr9:141087428-141087429 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
4 | rs112654241 | chr9:141087432-141087433 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
5 | rs201662446 | chr9:141087463-141087464 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
6 | rs111357935 | chr9:141087482-141087483 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
7 | rs541404501 | chr9:141087488-141087489 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
8 | rs201228647 | chr9:141087490-141087491 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
9 | rs76417957 | chr9:141087511-141087512 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
10 | rs113079269 | chr9:141087515-141087516 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
11 | rs561392148 | chr9:141087523-141087524 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
12 | rs115045843 | chr9:141087541-141087542 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
13 | rs117959765 | chr9:141087542-141087543 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
14 | rs149894461 | chr9:141087550-141087551 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
15 | rs147672197 | chr9:141087559-141087560 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
16 | rs143788400 | chr9:141087561-141087562 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
17 | rs141987964 | chr9:141087562-141087563 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
18 | rs148443534 | chr9:141087567-141087568 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
19 | rs147769899 | chr9:141087570-141087571 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
20 | rs138273097 | chr9:141087573-141087574 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
21 | rs540684432 | chr9:141087574-141087575 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
22 | rs564211423 | chr9:141087579-141087580 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
23 | rs146314912 | chr9:141087586-141087587 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
24 | rs149519112 | chr9:141087599-141087600 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
25 | rs142984101 | chr9:141087602-141087603 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs146844390 | chr9:141087605-141087606 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs141785316 | chr9:141087606-141087607 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs9942962 | chr9:141087643-141087644 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs368811830 | chr9:141087656-141087657 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs372444044 | chr9:141087657-141087658 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs558025559 | chr9:141087663-141087664 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs550361973 | chr9:141087691-141087692 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs375094864 | chr9:141087692-141087693 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs375271912 | chr9:141087713-141087714 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs529639927 | chr9:141087747-141087748 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs182566429 | chr9:141087775-141087776 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs368470419 | chr9:141087793-141087794 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs76897325 | chr9:141087797-141087798 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs371527353 | chr9:141087799-141087800 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Leukemia | 17361228 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Glioblastoma | 16823260 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Cardiac fibroma | 18329553 | CNVD |
Lung cancer | 19147751 | CNVD |
Cervical cancer | 17311676 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Gastric cancer | 17908304 | CNVD |
Adenoid cystic carcinoma | 18698036 | CNVD |
Salivary gland adenoid cystic carcinoma | 17545515 | CNVD |
Chordoma | 18071362 | CNVD |
Primary mediastinal b-cell lymphoma | 17728785 | CNVD |
Sudden cardiac death | 19188705 | CNVD |
Myoepithelioma | 18604193 | CNVD |
Tuberous sclerosis | 19566914 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Mantle cell lymphoma | 19029149 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr9:141087400-141087600 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
2 | chr9:141087600-141087800 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |