Variant report

Variant	nsv973632
Chromosome Location	chr9:44090734-44095961
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 253 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:253 , 50 per page) page: 1 2 3 4 5 6

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs568274019	chr9:44090778-44090779	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs535703984	chr9:44090825-44090826	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs113508260	chr9:44090837-44090838	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs557223676	chr9:44090850-44090851	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs569103764	chr9:44090854-44090855	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs539408540	chr9:44090876-44090877	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs557501158	chr9:44090879-44090880	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs572576430	chr9:44090889-44090890	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs373987732	chr9:44090895-44090896	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs555500053	chr9:44090903-44090904	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs573902483	chr9:44090931-44090932	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs544529146	chr9:44091073-44091074	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs563189739	chr9:44091118-44091119	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs201035064	chr9:44091138-44091139	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs533492929	chr9:44091142-44091143	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs186247436	chr9:44091158-44091159	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs111851384	chr9:44091159-44091160	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs71493010	chr9:44091168-44091169	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs71493011	chr9:44091184-44091185	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs201033096	chr9:44091185-44091186	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs78199312	chr9:44091199-44091200	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs71493012	chr9:44091212-44091213	Weak transcription	n/a	n/a	Overlapped CNVs	mRNA abundance
23	rs369651601	chr9:44091223-44091224	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs200581656	chr9:44091249-44091250	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs201564246	chr9:44091261-44091262	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs200206706	chr9:44091269-44091270	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs550715182	chr9:44091282-44091283	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs560495446	chr9:44091308-44091309	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs200129632	chr9:44091315-44091316	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs372403754	chr9:44091345-44091346	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs527749421	chr9:44091358-44091359	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs372615768	chr9:44091375-44091376	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs549506623	chr9:44091402-44091403	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs568214412	chr9:44091412-44091413	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs201223490	chr9:44091419-44091420	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs529097798	chr9:44091454-44091455	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs202018211	chr9:44091456-44091457	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs62538281	chr9:44091463-44091464	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs62538282	chr9:44091498-44091499	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs62538283	chr9:44091562-44091563	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs62538284	chr9:44091589-44091590	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs372911311	chr9:44091623-44091624	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs569117374	chr9:44091650-44091651	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs539374285	chr9:44091677-44091678	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs557703230	chr9:44091705-44091706	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs566140898	chr9:44091719-44091720	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs533596458	chr9:44091721-44091722	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs555044088	chr9:44091731-44091732	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs573445697	chr9:44091759-44091760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs377291510	chr9:44091816-44091817	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Melanoma	18172304	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Oral cancer	21386901	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21509527	CNVD
Sezary syndrome	18413736	CNVD
early-passage human iPS cells	21368824	CNVD
Schizophrenia	21346763	CNVD
Breast cancer	21990379	CNVD
Astrocytoma	22246337	CNVD
Lung adenocarcinoma	17086460	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Lung cancer	17086460	CNVD
Rhabdomyosarcoma	16790082	CNVD
Schizophrenia	20967226	CNVD
Schizophrenia	23813976	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:44071000-44092000	Weak transcription	Liver	Liver
2	chr9:44092000-44093400	Strong transcription	Liver	Liver
3	chr9:44093400-44109800	Weak transcription	Liver	Liver

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