Variant report

Variant	nsv973633
Chromosome Location	chr9:44091956-44098042
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 300 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:300 , 50 per page) page: 1 2 3 4 5 6

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs370140251	chr9:44091969-44091970	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs557319285	chr9:44091986-44091987	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs62538285	chr9:44092009-44092010	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs377739989	chr9:44092010-44092011	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs147728866	chr9:44092026-44092027	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs543090695	chr9:44092044-44092045	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs368018948	chr9:44092046-44092047	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs561358536	chr9:44092056-44092057	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs539265975	chr9:44092105-44092106	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs141002677	chr9:44092122-44092123	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs562557542	chr9:44092138-44092139	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs533214348	chr9:44092144-44092145	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs551266548	chr9:44092163-44092164	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs149783364	chr9:44092186-44092187	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs145354533	chr9:44092193-44092194	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs140702377	chr9:44092203-44092204	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs533537926	chr9:44092222-44092223	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs548604609	chr9:44092227-44092228	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs113318097	chr9:44092232-44092233	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs183233805	chr9:44092246-44092247	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs147270518	chr9:44092290-44092291	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs144507407	chr9:44092296-44092297	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs149068307	chr9:44092297-44092298	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs537563364	chr9:44092303-44092304	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs143626661	chr9:44092307-44092308	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs144651886	chr9:44092327-44092328	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs556681045	chr9:44092329-44092330	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs144976245	chr9:44092335-44092336	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs62538286	chr9:44092341-44092342	Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
30	rs554501919	chr9:44092358-44092359	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs147769695	chr9:44092360-44092361	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs543027157	chr9:44092369-44092370	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs561293640	chr9:44092405-44092406	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs576448476	chr9:44092496-44092497	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs199505885	chr9:44092498-44092499	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs562655639	chr9:44092537-44092538	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs532979315	chr9:44092548-44092549	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs187657352	chr9:44092562-44092563	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs560002336	chr9:44092575-44092576	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs566649553	chr9:44092585-44092586	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs527611005	chr9:44092623-44092624	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs190983920	chr9:44092642-44092643	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs555455879	chr9:44092643-44092644	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs113988356	chr9:44092645-44092646	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs549610718	chr9:44092654-44092655	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs571364534	chr9:44092681-44092682	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs538847153	chr9:44092721-44092722	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs372525451	chr9:44092755-44092756	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs200819005	chr9:44092760-44092761	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs554440613	chr9:44092805-44092806	Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Melanoma	18172304	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Oral cancer	21386901	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21509527	CNVD
Sezary syndrome	18413736	CNVD
early-passage human iPS cells	21368824	CNVD
Schizophrenia	21346763	CNVD
Breast cancer	21990379	CNVD
Astrocytoma	22246337	CNVD
Lung adenocarcinoma	17086460	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Lung cancer	17086460	CNVD
Rhabdomyosarcoma	16790082	CNVD
Schizophrenia	20967226	CNVD
Schizophrenia	23813976	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:44071000-44092000	Weak transcription	Liver	Liver
2	chr9:44092000-44093400	Strong transcription	Liver	Liver
3	chr9:44093400-44109800	Weak transcription	Liver	Liver

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