Variant report

Variant	nsv973757
Chromosome Location	chr9:95656277-95657574
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 71 )

Variant overlapped rSNPs/rCNVs (count:47 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs577764953	chr9:95656292-95656293	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs137988653	chr9:95656300-95656301	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs562790136	chr9:95656311-95656312	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs79254605	chr9:95656349-95656350	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs149183116	chr9:95656372-95656373	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs116047871	chr9:95656373-95656374	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs184682843	chr9:95656399-95656400	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs143353508	chr9:95656434-95656435	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs186903799	chr9:95656501-95656502	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs564879826	chr9:95656593-95656594	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs532717657	chr9:95656675-95656676	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs191304440	chr9:95656700-95656701	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs559586199	chr9:95656704-95656705	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs530349117	chr9:95656799-95656800	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs7044372	chr9:95656819-95656820	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs569703801	chr9:95656848-95656849	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs530856491	chr9:95656851-95656852	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs142283872	chr9:95656892-95656893	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs570888624	chr9:95656895-95656896	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs368504562	chr9:95656917-95656918	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs375164254	chr9:95656956-95656957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs554030038	chr9:95656984-95656985	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs565932522	chr9:95657009-95657010	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs117570280	chr9:95657010-95657011	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs554946876	chr9:95657013-95657014	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs575988861	chr9:95657021-95657022	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs114699210	chr9:95657022-95657023	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs16905839	chr9:95657053-95657054	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs541199598	chr9:95657146-95657147	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs559529178	chr9:95657152-95657153	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs530269358	chr9:95657176-95657177	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs542114575	chr9:95657183-95657184	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs184965305	chr9:95657184-95657185	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs573547875	chr9:95657233-95657234	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs117550505	chr9:95657243-95657244	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs146299560	chr9:95657289-95657290	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs12346689	chr9:95657299-95657300	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs12352388	chr9:95657305-95657306	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs545142822	chr9:95657317-95657318	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs547575510	chr9:95657321-95657322	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs10821036	chr9:95657330-95657331	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs138171520	chr9:95657394-95657395	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs554884668	chr9:95657396-95657397	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs530737970	chr9:95657425-95657426	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs569886575	chr9:95657490-95657491	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs189299542	chr9:95657541-95657542	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs558291913	chr9:95657553-95657554	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:71)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Bipolar disorder	18458673	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Biliary cancer	19435499	CNVD
small cell lung cancer	20016488	CNVD
Intracranial aneurysm	16715129	CNVD
Cardiac fibroma	18329553	CNVD
Mental retardation	21693067	CNVD
Breast cancer	17133270	CNVD
Basal cell nevus syndrome	21572526	CNVD
Mental retardation	19951919	CNVD
Retinoblastoma	22278416	CNVD
9q22.3 microdeletion syndrome	22283845	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Microcephaly	18830227	CNVD
overgrowth syndrome	16570072	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:95653400-95660600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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