Variant report
Variant | nsv974283 |
---|---|
Chromosome Location | chr14:46997862-47005132 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs191934744 | chr14:47004004-47004005 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs544176962 | chr14:47004012-47004013 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs375877361 | chr14:47004029-47004030 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs182210850 | chr14:47004032-47004033 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs575888353 | chr14:47004044-47004045 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs367660169 | chr14:47004049-47004050 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs542902246 | chr14:47004061-47004062 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs561575202 | chr14:47004067-47004068 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs545723900 | chr14:47004101-47004102 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs186795457 | chr14:47004102-47004103 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs369995936 | chr14:47004108-47004109 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs532686971 | chr14:47004128-47004129 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs372148613 | chr14:47004144-47004145 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs550944328 | chr14:47004160-47004161 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs569202772 | chr14:47004161-47004162 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs565231591 | chr14:47004162-47004163 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs2642087 | chr14:47004165-47004166 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
18 | rs572981911 | chr14:47004184-47004185 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs560130059 | chr14:47004238-47004239 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs533713166 | chr14:47004239-47004240 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs558361103 | chr14:47004244-47004245 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs576517014 | chr14:47004248-47004249 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs571347178 | chr14:47004252-47004253 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs149781857 | chr14:47004310-47004311 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs574310198 | chr14:47004311-47004312 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs145698629 | chr14:47004336-47004337 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs376935424 | chr14:47004344-47004345 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs573605371 | chr14:47004395-47004396 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs540814128 | chr14:47004429-47004430 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs565518229 | chr14:47004442-47004443 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs550390581 | chr14:47004449-47004450 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs532636266 | chr14:47004480-47004481 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs527682727 | chr14:47004488-47004489 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs386777144 | chr14:47004496-47004497 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs2123128 | chr14:47004498-47004499 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
36 | rs75376655 | chr14:47004507-47004508 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs548200975 | chr14:47004520-47004521 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs566408835 | chr14:47004524-47004525 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs527616895 | chr14:47004568-47004569 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs551947191 | chr14:47004570-47004571 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs570263445 | chr14:47004593-47004594 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs112122543 | chr14:47004608-47004609 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs112550162 | chr14:47004609-47004610 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs142315182 | chr14:47004632-47004633 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs570163032 | chr14:47004648-47004649 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs538099606 | chr14:47004671-47004672 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs573568588 | chr14:47004683-47004684 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs146125388 | chr14:47004693-47004694 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs536107146 | chr14:47004697-47004698 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs559296195 | chr14:47004768-47004769 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Esophageal cancer | 21851588 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Retinoblastoma | 21504564 | CNVD |
High-proliferative meningiomas | 17937814 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Cancer | 21637783 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Melanoma | 18172304 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Neuroblastoma | 19435921 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Breast cancer | 17899364 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Gastrointestinal stromal cancer | 20818650 | CNVD |
Renal cell carcinoma | 21668985 | CNVD |
Chronic myeloid leukemia | 20724749 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Wilms tumour | 21544195 | CNVD |
Lung cancer | 18438408 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Breast cancer | 21785460 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Prostate cancer | 18632612 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Breast cancer | 21858162 | CNVD |
Hirschsprung''s Disease | 21712996 | CNVD |
Cancer | 21183584 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Renal cell carcinoma | 18194544 | CNVD |
Invasive pancreatic ductal carcinoma | 16982739 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Acute lymphoblastic leukemia | 21098271 | CNVD |
Cancer | 20164919 | CNVD |
Breast cancer | 22522925 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Cancer | 19907438 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:47004000-47004600 | Enhancers | Primary B cells from peripheral blood | blood |
2 | chr14:47004400-47005000 | Enhancers | Primary B cells from cord blood | blood |