Variant report

Variant	nsv975092
Chromosome Location	chr11:24292155-24308952
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 124 )
Associated
traits (count: 55 )

Variant overlapped rSNPs/rCNVs (count:124 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs186261990	chr11:24295806-24295807	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs556037789	chr11:24295808-24295809	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs565886259	chr11:24295821-24295822	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs191554526	chr11:24295828-24295829	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs558247791	chr11:24295829-24295830	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs562488337	chr11:24295831-24295832	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs138277249	chr11:24295860-24295861	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs558408564	chr11:24295864-24295865	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs543619170	chr11:24295931-24295932	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs34237482	chr11:24295932-24295933	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs7941780	chr11:24295949-24295950	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs74233532	chr11:24295950-24295951	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs186816973	chr11:24295964-24295965	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs117877908	chr11:24295969-24295970	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs544640997	chr11:24295974-24295975	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs564616761	chr11:24295991-24295992	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs530568215	chr11:24295992-24295993	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs550341511	chr11:24296008-24296009	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs7928616	chr11:24296060-24296061	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs118094915	chr11:24296065-24296066	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs549380276	chr11:24296066-24296067	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs566389469	chr11:24296070-24296071	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs187249694	chr11:24296075-24296076	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs539221081	chr11:24296084-24296085	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs35397836	chr11:24296092-24296093	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs550240097	chr11:24296101-24296102	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs192941983	chr11:24296109-24296110	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs537188838	chr11:24296110-24296111	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs557436234	chr11:24296114-24296115	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs573726463	chr11:24296118-24296119	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs116179712	chr11:24296119-24296120	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs374248903	chr11:24296126-24296127	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs55751762	chr11:24296146-24296147	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs185406351	chr11:24296160-24296161	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs149625024	chr11:24296161-24296162	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs554231926	chr11:24296184-24296185	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs568882278	chr11:24307040-24307041	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs77251714	chr11:24307043-24307044	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs527403718	chr11:24307052-24307053	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs183913479	chr11:24307068-24307069	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs114104289	chr11:24307114-24307115	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs553609315	chr11:24307117-24307118	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs573506105	chr11:24307148-24307149	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs545456568	chr11:24307149-24307150	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs545691838	chr11:24307155-24307156	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs73438291	chr11:24307171-24307172	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs78615181	chr11:24307175-24307176	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs12270675	chr11:24307215-24307216	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs561077327	chr11:24307260-24307261	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs542714966	chr11:24307275-24307276	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:55)

Disease	PMID	Source
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Multiple myeloma	16461302	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Renal cell carcinoma	18194544	CNVD
Myelofibrosis	22110671	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Autism	22102821	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	21364760	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:24295800-24296200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:24307000-24309800	Enhancers	Dnd41	blood

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