Variant report

Variant	nsv975096
Chromosome Location	chr11:26549477-26551091
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 91 )
Associated
traits (count: 53 )

Variant overlapped rSNPs/rCNVs (count:91 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs547093994	chr11:26549498-26549499	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs551910060	chr11:26549544-26549545	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs183027097	chr11:26549601-26549602	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs528165542	chr11:26549631-26549632	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs187313952	chr11:26549640-26549641	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs369392	chr11:26549650-26549651	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs530226413	chr11:26549667-26549668	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs556970213	chr11:26549674-26549675	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs569088815	chr11:26549689-26549690	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs539363919	chr11:26549690-26549691	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs11029597	chr11:26549736-26549737	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs548243968	chr11:26549744-26549745	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs200964312	chr11:26549837-26549838	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs191718698	chr11:26549857-26549858	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs138413647	chr11:26549924-26549925	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs539241012	chr11:26549935-26549936	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs551033035	chr11:26549945-26549946	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs555475502	chr11:26550009-26550010	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs10767546	chr11:26550079-26550080	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs544642200	chr11:26550127-26550128	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs113159397	chr11:26550164-26550165	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs2663159	chr11:26550190-26550191	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs373214308	chr11:26550210-26550211	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs182382245	chr11:26550211-26550212	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs112936475	chr11:26550276-26550277	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs566906233	chr11:26550277-26550278	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs142824627	chr11:26550282-26550283	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs1472933	chr11:26550303-26550304	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs528981598	chr11:26550335-26550336	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs186869126	chr11:26550387-26550388	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs556484430	chr11:26550405-26550406	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs568777783	chr11:26550445-26550446	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs372375531	chr11:26550657-26550658	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs201619513	chr11:26550658-26550659	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs375698411	chr11:26550662-26550663	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs192179758	chr11:26550663-26550664	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs370067461	chr11:26550674-26550675	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs185709970	chr11:26550676-26550677	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs12805049	chr11:26550678-26550679	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs190379314	chr11:26550679-26550680	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs12805056	chr11:26550685-26550686	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs372687093	chr11:26550688-26550689	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs372597973	chr11:26550690-26550691	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs12805071	chr11:26550711-26550712	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs375042415	chr11:26550759-26550760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs369558091	chr11:26550765-26550766	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs373719503	chr11:26550771-26550772	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs71047860	chr11:26550777-26550778	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs377243455	chr11:26550778-26550779	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs71462716	chr11:26550779-26550780	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:53)

Disease	PMID	Source
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Autism	22102821	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Neuroticism	17667963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26506400-26564600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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