Variant report

Variant	nsv975179
Chromosome Location	chr11:49979925-49997377
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 80 )
Associated
traits (count: 43 )

Variant overlapped rSNPs/rCNVs (count:80 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs188821245	chr11:49982808-49982809	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs192824013	chr11:49982838-49982839	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs150950378	chr11:49982865-49982866	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs575809106	chr11:49982876-49982877	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs541703611	chr11:49982897-49982898	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs184129052	chr11:49982898-49982899	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs527600224	chr11:49982911-49982912	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs140724046	chr11:49982937-49982938	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs569436966	chr11:49982973-49982974	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs1949795	chr11:49982974-49982975	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs555058455	chr11:49982977-49982978	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs371386485	chr11:49983000-49983001	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs569812913	chr11:49983003-49983004	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs538423158	chr11:49983004-49983005	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs548504746	chr11:49983006-49983007	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs145726532	chr11:49983030-49983031	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs187754329	chr11:49983037-49983038	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs553718548	chr11:49983068-49983069	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs576814485	chr11:49983076-49983077	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs4528310	chr11:49983106-49983107	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs192467435	chr11:49983125-49983126	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs541968162	chr11:49983134-49983135	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs528155921	chr11:49983143-49983144	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs55801025	chr11:49983207-49983208	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs561736288	chr11:49983247-49983248	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs183892325	chr11:49983265-49983266	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs574867928	chr11:49983305-49983306	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs78806922	chr11:49983318-49983319	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs540306227	chr11:49983319-49983320	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs111807164	chr11:49983322-49983323	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs527313435	chr11:49983326-49983327	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs11040682	chr11:49983355-49983356	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs528981396	chr11:49983382-49983383	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs4329694	chr11:49983402-49983403	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs568579006	chr11:49983407-49983408	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs146902282	chr11:49983408-49983409	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs547665190	chr11:49983427-49983428	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs570859400	chr11:49983439-49983440	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs188266876	chr11:49983527-49983528	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs539440124	chr11:49983537-49983538	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs556148513	chr11:49983539-49983540	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs570086696	chr11:49983633-49983634	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs7932683	chr11:49983640-49983641	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs376229344	chr11:49983650-49983651	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs7947526	chr11:49983654-49983655	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs572125568	chr11:49983660-49983661	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs541272346	chr11:49983686-49983687	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs558072407	chr11:49983688-49983689	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs578004358	chr11:49983689-49983690	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs543393689	chr11:49983703-49983704	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:43)

Disease	PMID	Source
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Wilms tumour	21544195	CNVD
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Renal cell carcinoma	18194544	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Hirschsprung''s Disease	21712996	CNVD
Follicular lymphoma	20505157	CNVD
Colorectal cancer	21128281	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21990379	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
small cell lung cancer	20016488	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:49982800-49984200	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell

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