Variant report

Variant	nsv975793
Chromosome Location	chr10:26413277-26416584
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 118 )
Associated
traits (count: 43 )

Variant overlapped rSNPs/rCNVs (count:118 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs529264604	chr10:26413330-26413331	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs543084469	chr10:26413420-26413421	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs576825090	chr10:26413450-26413451	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs559793527	chr10:26413457-26413458	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs144005591	chr10:26413463-26413464	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs115781816	chr10:26413469-26413470	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs546320507	chr10:26413484-26413485	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs571318408	chr10:26413497-26413498	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs530638230	chr10:26413512-26413513	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs192104591	chr10:26413518-26413519	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs1891382	chr10:26413547-26413548	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs116843838	chr10:26413552-26413553	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs368375217	chr10:26413554-26413555	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs184096607	chr10:26413609-26413610	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs573411712	chr10:26413650-26413651	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs538323178	chr10:26413671-26413672	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs148750296	chr10:26413691-26413692	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs188193784	chr10:26413734-26413735	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs75501711	chr10:26413743-26413744	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs142300175	chr10:26413835-26413836	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs12770582	chr10:26413858-26413859	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs557679128	chr10:26413863-26413864	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs75530176	chr10:26413953-26413954	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs557226962	chr10:26413963-26413964	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs543021324	chr10:26413983-26413984	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs577364674	chr10:26414025-26414026	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs573205306	chr10:26414044-26414045	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs545141524	chr10:26414056-26414057	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs3817416	chr10:26414106-26414107	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs151249856	chr10:26414180-26414181	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs550409550	chr10:26414188-26414189	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs560830889	chr10:26414191-26414192	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs529973559	chr10:26414209-26414210	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs139912855	chr10:26414212-26414213	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs193179170	chr10:26414231-26414232	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs61840842	chr10:26414274-26414275	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs538741318	chr10:26414303-26414304	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs376216830	chr10:26414304-26414305	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs150485915	chr10:26414327-26414328	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs369319547	chr10:26414344-26414345	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs61736328	chr10:26414359-26414360	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs112195128	chr10:26414394-26414395	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs34675245	chr10:26414397-26414398	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs201181958	chr10:26414398-26414399	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs375739230	chr10:26414410-26414411	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs370314254	chr10:26414413-26414414	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs200162942	chr10:26414420-26414421	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs374609833	chr10:26414429-26414430	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs56207573	chr10:26414439-26414440	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs377435493	chr10:26414455-26414456	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:43)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
T-cell lymphomas	19863542	CNVD
Esophageal cancer	21851588	CNVD
small cell lung cancer	20016488	CNVD
Behavioral abnormalities	21522184	CNVD
Dysmorphic features	21522184	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Myelofibrosis	22110671	CNVD
Autism	21439084	CNVD
Maculopathy	20981449	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioblastoma multiforme	21525872	CNVD
Adrenocortical carcinoma	18281524	CNVD
Breast cancer	21364760	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26402000-26436200	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr10:26410200-26425000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr10:26416400-26418000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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