Variant report

Variant	nsv975822
Chromosome Location	chr10:110633993-110639185
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 51 )
Associated
traits (count: 69 )

Variant overlapped rSNPs/rCNVs (count:51 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs533004011	chr10:110636454-110636455	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs2461320	chr10:110636462-110636463	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs563407247	chr10:110636470-110636471	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs528960891	chr10:110636482-110636483	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs548787158	chr10:110636567-110636568	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs568526517	chr10:110636591-110636592	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs540511960	chr10:110636613-110636614	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs112930477	chr10:110636643-110636644	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs369199050	chr10:110636674-110636675	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs547641150	chr10:110636684-110636685	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs570807640	chr10:110636689-110636690	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs190118819	chr10:110636708-110636709	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs181265770	chr10:110636709-110636710	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs186525322	chr10:110636726-110636727	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs34633864	chr10:110636750-110636751	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs142646993	chr10:110636779-110636780	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs35102904	chr10:110636793-110636794	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs572098977	chr10:110636796-110636797	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs151046629	chr10:110636797-110636798	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs558123379	chr10:110636840-110636841	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs577986127	chr10:110636856-110636857	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs543471476	chr10:110636898-110636899	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs563247270	chr10:110636921-110636922	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs528999621	chr10:110636928-110636929	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs140932471	chr10:110636931-110636932	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs144749977	chr10:110636932-110636933	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs147899109	chr10:110636962-110636963	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs189269059	chr10:110637011-110637012	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs180874895	chr10:110637039-110637040	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs570846272	chr10:110637128-110637129	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs533416440	chr10:110637168-110637169	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs549777999	chr10:110637177-110637178	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs569908304	chr10:110637178-110637179	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs540088152	chr10:110637222-110637223	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs186123943	chr10:110637227-110637228	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs377415358	chr10:110637230-110637231	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs141612872	chr10:110637247-110637248	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs372355097	chr10:110637324-110637325	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs111890124	chr10:110637363-110637364	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs190981497	chr10:110637386-110637387	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs530694047	chr10:110637389-110637390	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs10596845	chr10:110637392-110637393	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs551995057	chr10:110637393-110637394	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs557963341	chr10:110637402-110637403	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs145298529	chr10:110637405-110637406	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs543706101	chr10:110637416-110637417	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs556926144	chr10:110637425-110637426	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs377152868	chr10:110637508-110637509	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs75711814	chr10:110637525-110637526	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs542607466	chr10:110637582-110637583	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:69)

Disease	PMID	Source
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21785460	CNVD
Acute myeloid leukemia	20729466	CNVD
Paraganglioma	17535989	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Pulmonary chondroma	17535989	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	17387387	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	16573809	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	16608533	CNVD
small cell lung cancer	20016488	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	17393978	CNVD
Ovarian cancer	21720365	CNVD
renal hypoplasia	20603712	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Myxofibrosarcoma	16751306	CNVD
Cornelia de Lange syndrome	24599119	CNVD
T-cell lymphomas	19863542	CNVD
Breast cancer	16397240	CNVD
Urothelial carcinoma	21177765	CNVD
Multiple myeloma	16616336	CNVD
Chronic lymphocytic leukemia	18645599	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	21509527	CNVD
Breast cancer	21364760	CNVD
Barrett''s syndrome	19417022	CNVD
Sezary syndrome	18413736	CNVD

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:110636400-110637200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr10:110636400-110637600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr10:110636600-110637000	Enhancers	Liver	Liver
4	chr10:110636600-110637200	Enhancers	Colon Smooth Muscle	Colon
5	chr10:110636600-110637400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr10:110636600-110637400	Enhancers	Fetal Stomach	stomach
7	chr10:110636800-110637600	Enhancers	Placenta Amnion	Placenta Amnion
8	chr10:110637000-110637400	Enhancers	Pancreatic Islets	Pancreatic Islet
9	chr10:110637000-110637600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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