Variant report

Variant	nsv976505
Chromosome Location	chr11:106795037-106802899
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 267 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:267 , 50 per page) page: 1 2 3 4 5 6

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs188634411	chr11:106795080-106795081	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs567031250	chr11:106795095-106795096	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs191931392	chr11:106795096-106795097	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs7929753	chr11:106795127-106795128	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
5	rs371644589	chr11:106795165-106795166	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs78464459	chr11:106795199-106795200	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs574669591	chr11:106795206-106795207	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs57421455	chr11:106795210-106795211	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs113942767	chr11:106795238-106795239	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs578173045	chr11:106795255-106795256	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs546005312	chr11:106795262-106795263	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs115691701	chr11:106795278-106795279	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs573024392	chr11:106795349-106795350	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs80204584	chr11:106795357-106795358	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs377471023	chr11:106795362-106795363	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs113202136	chr11:106795372-106795373	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs528879986	chr11:106795373-106795374	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs543847853	chr11:106795404-106795405	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs118004387	chr11:106795449-106795450	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs532895580	chr11:106795460-106795461	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs551531159	chr11:106795486-106795487	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs567070461	chr11:106795497-106795498	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs112536079	chr11:106795511-106795512	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs549656437	chr11:106795623-106795624	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs117795385	chr11:106795663-106795664	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs538232337	chr11:106795679-106795680	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs556628318	chr11:106795725-106795726	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs374266501	chr11:106795726-106795727	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs138460334	chr11:106795756-106795757	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs557631293	chr11:106795801-106795802	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs573001650	chr11:106795826-106795827	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs540102152	chr11:106795833-106795834	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs555628122	chr11:106795843-106795844	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs374062576	chr11:106795857-106795858	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs564877795	chr11:106795869-106795870	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs368645100	chr11:106795883-106795884	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs551963613	chr11:106795884-106795885	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs374842166	chr11:106795931-106795932	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs371916963	chr11:106795940-106795941	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs35721479	chr11:106795992-106795993	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs111449307	chr11:106795993-106795994	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs543785920	chr11:106796087-106796088	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs527260071	chr11:106796091-106796092	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs547453585	chr11:106796106-106796107	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs144201753	chr11:106796108-106796109	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs184441261	chr11:106796148-106796149	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs559877404	chr11:106796164-106796165	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs189195419	chr11:106796262-106796263	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs560436058	chr11:106796281-106796282	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs527881509	chr11:106796295-106796296	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	16608533	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21958427	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17603634	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Basal cell lymphoma	16790693	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21364760	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Mental retardation	19966786	CNVD
Non-small cell lung cancer	21829676	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Intracranial aneurysm	16715129	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Urothelial carcinoma	21177765	CNVD
Myelofibrosis	22110671	CNVD
Ovarian cancer	21720365	CNVD
Chronic lymphocytic leukemia	17805327	CNVD
Glioblastoma multiforme	22286061	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Neuroblastoma	17327916	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Mantle cell lymphoma	19029149	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant melanoma	17260012	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	18632612	CNVD
Obesity	19966786	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106786200-106806800	Weak transcription	Fetal Lung	lung
2	chr11:106792600-106795600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr11:106793000-106796400	Weak transcription	NHDF-Ad	bronchial
4	chr11:106795000-106810600	Weak transcription	Fetal Brain Male	brain
5	chr11:106795600-106797800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr11:106795800-106796800	Enhancers	Fetal Heart	heart
7	chr11:106796000-106797600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr11:106796400-106797200	Enhancers	NHDF-Ad	bronchial
9	chr11:106796400-106797200	Enhancers	NHLF	lung
10	chr11:106796600-106797600	Enhancers	NH-A	brain
11	chr11:106796800-106797200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr11:106797000-106797600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr11:106797200-106799200	Weak transcription	NHDF-Ad	bronchial
14	chr11:106799200-106799600	ZNF genes & repeats	NHDF-Ad	bronchial
15	chr11:106801400-106802600	Enhancers	Ovary	ovary

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