Variant report

Variant nsv978393
Chromosome Location chr17:20841928-20851802
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:20827200-20856200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr17:20831000-20846800 Weak transcription iPS-20b Cell Line embryonic stem cell
3 chr17:20831000-20847200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr17:20831400-20847000 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr17:20831600-20845800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr17:20832400-20847800 Weak transcription Gastric stomach
7 chr17:20834200-20846800 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr17:20834600-20847200 Weak transcription H1 Cell Line embryonic stem cell
9 chr17:20834600-20847800 Weak transcription H9 Cell Line embryonic stem cell
10 chr17:20835600-20869000 Weak transcription HepG2 liver
11 chr17:20838600-20852400 Weak transcription K562 blood
12 chr17:20839400-20842400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr17:20839600-20844800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr17:20840600-20842200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
15 chr17:20840800-20842200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr17:20841200-20842200 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
17 chr17:20841400-20842200 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr17:20841400-20842600 Weak transcription NHDF-Ad bronchial
19 chr17:20841600-20847400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr17:20842200-20843200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr17:20842200-20845000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr17:20842400-20843200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr17:20842600-20842800 Enhancers NHDF-Ad bronchial
24 chr17:20843200-20845400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr17:20843200-20852200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr17:20844400-20844600 Enhancers Placenta Placenta
27 chr17:20844600-20847600 Weak transcription Placenta Placenta
28 chr17:20845000-20845400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
29 chr17:20845400-20845600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr17:20845400-20847200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr17:20845600-20847200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr17:20845800-20846600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr17:20846600-20856200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr17:20846800-20848000 Enhancers ES-WA7 Cell Line embryonic stem cell
35 chr17:20846800-20848200 Enhancers iPS-18 Cell Line embryonic stem cell
36 chr17:20846800-20848400 Enhancers iPS-20b Cell Line embryonic stem cell
37 chr17:20847000-20847200 Enhancers iPS-15b Cell Line embryonic stem cell
38 chr17:20847000-20847400 Enhancers ES-I3 Cell Line embryonic stem cell
39 chr17:20847000-20847600 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr17:20847200-20847600 Enhancers HUES64 Cell Line embryonic stem cell
41 chr17:20847200-20847600 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
42 chr17:20847200-20847800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr17:20847200-20848200 Enhancers H1 Cell Line embryonic stem cell
44 chr17:20847200-20848200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr17:20847200-20848200 Enhancers HUES48 Cell Line embryonic stem cell
46 chr17:20847200-20848200 Enhancers HUES6 Cell Line embryonic stem cell
47 chr17:20847200-20848200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
48 chr17:20847200-20848200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
49 chr17:20847200-20848200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
50 chr17:20847400-20847600 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin

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