No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs554299648 |
chr2:172373130-172373131 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs566077355 |
chr2:172373132-172373133 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs189124991 |
chr2:172373242-172373243 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs202144876 |
chr2:172373271-172373272 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs5836341 |
chr2:172373273-172373274 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs397873268 |
chr2:172373274-172373275 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs76739758 |
chr2:172373335-172373336 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
mRNA abundance
|
8 |
rs541790833 |
chr2:172373353-172373354 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs576394050 |
chr2:172373373-172373374 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs57826998 |
chr2:172373425-172373426 |
Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
11 |
rs374428194 |
chr2:172373458-172373459 |
Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs555684847 |
chr2:172373484-172373485 |
Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs1476110 |
chr2:172373507-172373508 |
Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
14 |
rs374332745 |
chr2:172373509-172373510 |
Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs181024930 |
chr2:172373519-172373520 |
Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs560169696 |
chr2:172373520-172373521 |
Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs148032138 |
chr2:172373535-172373536 |
Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs545900420 |
chr2:172373596-172373597 |
Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs549586124 |
chr2:172373597-172373598 |
Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs141793514 |
chr2:172373603-172373604 |
Weak transcription Enhancers Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs185392208 |
chr2:172373608-172373609 |
Weak transcription Enhancers Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs146358443 |
chr2:172373631-172373632 |
Weak transcription Enhancers Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs550097342 |
chr2:172373665-172373666 |
Weak transcription Enhancers Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs558408991 |
chr2:172373667-172373668 |
Weak transcription Enhancers Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs371392064 |
chr2:172373703-172373704 |
Weak transcription Enhancers Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs568405417 |
chr2:172373705-172373706 |
Weak transcription Enhancers Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs529085183 |
chr2:172373724-172373725 |
Weak transcription Enhancers Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs200342981 |
chr2:172373732-172373733 |
Weak transcription Enhancers Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs188688071 |
chr2:172373761-172373762 |
Weak transcription Enhancers Active TSS ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs565881707 |
chr2:172373786-172373787 |
Weak transcription Enhancers Active TSS ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs150577215 |
chr2:172373799-172373800 |
Weak transcription Enhancers Active TSS ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs202149263 |
chr2:172373805-172373806 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs181429618 |
chr2:172373825-172373826 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs113051268 |
chr2:172373843-172373844 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs555623039 |
chr2:172373864-172373865 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs574020085 |
chr2:172373881-172373882 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs541349303 |
chr2:172373913-172373914 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs553258638 |
chr2:172373919-172373920 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs578133345 |
chr2:172373924-172373925 |
Weak transcription Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs138537929 |
chr2:172373963-172373964 |
Weak transcription Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs564254721 |
chr2:172373981-172373982 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs576097523 |
chr2:172373984-172373985 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs543478741 |
chr2:172373993-172373994 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs6433295 |
chr2:172374000-172374001 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
mRNA abundance
|
45 |
rs186858760 |
chr2:172374001-172374002 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs547677934 |
chr2:172374017-172374018 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs559236249 |
chr2:172374043-172374044 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs6433296 |
chr2:172374078-172374079 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
mRNA abundance
|
49 |
rs139230888 |
chr2:172374108-172374109 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs570164382 |
chr2:172374111-172374112 |
Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|