Variant report

Variant	nsv979557
Chromosome Location	chr21:15325613-15327370
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 106 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:106 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs146387669	chr21:15325615-15325616	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs546690645	chr21:15325659-15325660	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs2822315	chr21:15325666-15325667	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs529297262	chr21:15325697-15325698	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs548062201	chr21:15325704-15325705	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs184079185	chr21:15325729-15325730	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs377052609	chr21:15325734-15325735	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs368464399	chr21:15325798-15325799	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs557090761	chr21:15325820-15325821	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs186718096	chr21:15325823-15325824	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs148569262	chr21:15325975-15325976	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs34946620	chr21:15325980-15325981	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs35839726	chr21:15326001-15326002	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs35599286	chr21:15326005-15326006	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs34938678	chr21:15326046-15326047	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs141927822	chr21:15326050-15326051	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs76007062	chr21:15326067-15326068	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs541874700	chr21:15326070-15326071	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs35802154	chr21:15326090-15326091	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs150745739	chr21:15326109-15326110	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs34666391	chr21:15326112-15326113	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs544598704	chr21:15326113-15326114	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs35953941	chr21:15326119-15326120	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs539428152	chr21:15326128-15326129	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs139070438	chr21:15326135-15326136	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs380592	chr21:15326136-15326137	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs540328771	chr21:15326143-15326144	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs560243127	chr21:15326161-15326162	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs529237932	chr21:15326168-15326169	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs36018960	chr21:15326199-15326200	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs427055	chr21:15326213-15326214	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs201480281	chr21:15326265-15326266	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs35239236	chr21:15326266-15326267	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs35075067	chr21:15326269-15326270	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs532707917	chr21:15326284-15326285	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs188576550	chr21:15326285-15326286	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs35213397	chr21:15326291-15326292	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs570614391	chr21:15326301-15326302	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs552806226	chr21:15326312-15326313	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs539690920	chr21:15326328-15326329	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs381239	chr21:15326329-15326330	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs34912284	chr21:15326338-15326339	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs566605108	chr21:15326339-15326340	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs140272492	chr21:15326357-15326358	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs374612634	chr21:15326378-15326379	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs555311970	chr21:15326397-15326398	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs575132145	chr21:15326402-15326403	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs8127713	chr21:15326405-15326406	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs558216138	chr21:15326408-15326409	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs35507209	chr21:15326415-15326416	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Ovarian cancer	21720365	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Down syndrome	17412756	CNVD
Down syndrome	17576883	CNVD
Acute promyelocytic leukemia	19109227	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Sudden cardiac death	19188705	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Breast cancer	21509527	CNVD
T-cell lymphomas	19863542	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	17387387	CNVD
Renal cell carcinoma	19461508	CNVD
Seminomas	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Metanephric adenoma	20802469	CNVD
Neuroblastoma	18923191	CNVD
Prostate cancer	19156837	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Cancer	20164919	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	20409316	CNVD
Autism	18414403	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
lymphocytic leukemia	21291569	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute myeloid leukemia	21251322	CNVD
abnormal development	18461090	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21364760	CNVD
Melanoma	17363583	CNVD
Breast cancer	22522925	CNVD
Multiple myeloma	17550852	CNVD
Myelofibrosis	22110671	CNVD
Alzheimer''s disease	18923514	CNVD
Alzheimer''s disease	20877625	CNVD
Follicular lymphoma	20505157	CNVD
Alzheimer''s disease	21956041	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Melanoma	18172304	CNVD
Autism	22958593	CNVD
Schizophrenia	22958593	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:15310400-15347400	Weak transcription	Dnd41	blood

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