Variant report
Variant | nsv979639 |
---|---|
Chromosome Location | chr22:20694476-20744745 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:817)
- CpG islands (count:735)
- Chromatin interactive region (count:13)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ATF1 | chr22:20732632-20732673 | K562 | blood: | n/a | n/a |
2 | BACH1 | chr22:20743575-20743699 | K562 | blood: | n/a | n/a |
3 | BATF | chr22:20704837-20705151 | GM12878 | blood: | n/a | n/a |
4 | BATF | chr22:20705491-20705797 | GM12878 | blood: | n/a | chr22:20705604-20705614 |
5 | BATF | chr22:20727428-20727937 | GM12878 | blood: | n/a | n/a |
6 | BATF | chr22:20697648-20697855 | GM12878 | blood: | n/a | n/a |
7 | BATF | chr22:20705452-20705653 | GM12878 | blood: | n/a | chr22:20705604-20705614 |
8 | BATF | chr22:20704152-20704420 | GM12878 | blood: | n/a | n/a |
9 | BATF | chr22:20701125-20701590 | GM12878 | blood: | n/a | n/a |
10 | BATF | chr22:20706564-20706772 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr22:20695672-20695836 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr22:20700720-20701058 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr22:20727592-20727807 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr22:20695109-20695381 | GM12878 | blood: | n/a | chr22:20695212-20695223 |
15 | BATF | chr22:20743184-20743435 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr22:20726790-20727181 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr22:20707505-20707718 | GM12878 | blood: | n/a | n/a |
18 | BCL11A | chr22:20712476-20712907 | GM12878 | blood: | n/a | n/a |
19 | BCL11A | chr22:20714454-20714688 | GM12878 | blood: | n/a | n/a |
20 | BCL11A | chr22:20711652-20711880 | GM12878 | blood: | n/a | n/a |
21 | BCL11A | chr22:20707623-20707920 | GM12878 | blood: | n/a | n/a |
22 | BCL11A | chr22:20716241-20716624 | GM12878 | blood: | n/a | n/a |
23 | BCL11A | chr22:20714841-20715417 | GM12878 | blood: | n/a | n/a |
24 | BCL11A | chr22:20714069-20714360 | GM12878 | blood: | n/a | n/a |
25 | BCL11A | chr22:20695093-20695286 | GM12878 | blood: | n/a | chr22:20695103-20695112 chr22:20695212-20695221 |
26 | BCL11A | chr22:20715129-20715531 | GM12878 | blood: | n/a | n/a |
27 | BCL11A | chr22:20712920-20713186 | GM12878 | blood: | n/a | n/a |
28 | BCL11A | chr22:20700742-20701651 | GM12878 | blood: | n/a | n/a |
29 | BCL11A | chr22:20703665-20703934 | GM12878 | blood: | n/a | n/a |
30 | BCL11A | chr22:20694397-20694737 | GM12878 | blood: | n/a | chr22:20694629-20694638 |
31 | BCL11A | chr22:20700654-20701413 | GM12878 | blood: | n/a | n/a |
32 | BCL11A | chr22:20714085-20714341 | GM12878 | blood: | n/a | n/a |
33 | BCL11A | chr22:20706545-20706782 | GM12878 | blood: | n/a | n/a |
34 | BCL11A | chr22:20715598-20716217 | GM12878 | blood: | n/a | n/a |
35 | BCL11A | chr22:20714405-20714728 | GM12878 | blood: | n/a | n/a |
36 | BCL11A | chr22:20696767-20697036 | GM12878 | blood: | n/a | n/a |
37 | BCL11A | chr22:20711473-20712251 | GM12878 | blood: | n/a | n/a |
38 | BCL11A | chr22:20709346-20709926 | GM12878 | blood: | n/a | n/a |
39 | BCL11A | chr22:20697151-20697358 | GM12878 | blood: | n/a | n/a |
40 | BCL11A | chr22:20712252-20712446 | GM12878 | blood: | n/a | n/a |
41 | BCL11A | chr22:20710765-20711470 | GM12878 | blood: | n/a | n/a |
42 | BCL11A | chr22:20713487-20713744 | GM12878 | blood: | n/a | n/a |
43 | BCL11A | chr22:20709939-20710325 | GM12878 | blood: | n/a | n/a |
44 | BCL11A | chr22:20709924-20710368 | GM12878 | blood: | n/a | n/a |
45 | BCL11A | chr22:20716224-20716396 | GM12878 | blood: | n/a | n/a |
46 | BCL11A | chr22:20710741-20711029 | GM12878 | blood: | n/a | n/a |
47 | BCL11A | chr22:20715541-20716107 | GM12878 | blood: | n/a | n/a |
48 | BCL3 | chr22:20715275-20715674 | GM12878 | blood: | n/a | n/a |
49 | BCL3 | chr22:20708529-20708958 | GM12878 | blood: | n/a | n/a |
50 | BCL3 | chr22:20713525-20713740 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:20716397-20716447 | CMK | blood: | n/a |
2 | chr22:20715555-20715605 | NHBE | bronchial: | n/a |
3 | chr22:20710577-20710627 | RPTEC | kidney: | n/a |
4 | chr22:20716397-20716447 | CMK | blood: | n/a |
5 | chr22:20715555-20715605 | NHBE | bronchial: | n/a |
6 | chr22:20710577-20710627 | RPTEC | kidney: | n/a |
7 | chr22:20716554-20716604 | SKMC | muscle: | n/a |
8 | chr22:20710577-20710627 | HRCEpiC | kidney: | n/a |
9 | chr22:20706928-20706978 | HAEpiC | amniotic membrane: | n/a |
10 | chr22:20710577-20710627 | HNPCEpiC | eye: | n/a |
11 | chr22:20708652-20708702 | SKMC | muscle: | n/a |
12 | chr22:20708652-20708702 | Hepatocyte | liver: | n/a |
13 | chr22:20708652-20708702 | AG04449 | skin: | fetal |
14 | chr22:20714779-20714829 | SK-N-SH_RA | brain: | n/a |
15 | chr22:20714779-20714829 | AG09309 | skin: | n/a |
16 | chr22:20714779-20714829 | HRCEpiC | kidney: | n/a |
17 | chr22:20715555-20715605 | Hepatocyte | liver: | n/a |
18 | chr22:20713372-20713422 | LNCaP | prostate: | n/a |
19 | chr22:20714779-20714829 | GM12891 | blood: | n/a |
20 | chr22:20710577-20710627 | Hela-S3 | cervix: | n/a |
21 | chr22:20712476-20712526 | SK-N-MC | brain: | n/a |
22 | chr22:20711027-20711077 | RPTEC | kidney: | n/a |
23 | chr22:20718691-20718741 | HCM | heart: | n/a |
24 | chr22:20708652-20708702 | Caco-2 | colon: | n/a |
25 | chr22:20706928-20706978 | HRCEpiC | kidney: | n/a |
26 | chr22:20711027-20711077 | MCF10A-Er-Src | breast: | n/a |
27 | chr22:20716554-20716604 | MCF10A-Er-Src | breast: | n/a |
28 | chr22:20710577-20710627 | Jurkat | blood: | n/a |
29 | chr22:20714779-20714829 | IMR90 | lung: | fetal |
30 | chr22:20711027-20711077 | T-47D | breast: | n/a |
31 | chr22:20715555-20715605 | ProgFib | skin: | n/a |
32 | chr22:20714779-20714829 | NHDF-neo | bronchial: | n/a |
33 | chr22:20716864-20716914 | NHDF-neo | bronchial: | n/a |
34 | chr22:20718691-20718741 | Hela-S3 | cervix: | n/a |
35 | chr22:20712476-20712526 | IMR90 | lung: | fetal |
36 | chr22:20706928-20706978 | ProgFib | skin: | n/a |
37 | chr22:20714779-20714829 | BJ | skin: | n/a |
38 | chr22:20716397-20716447 | MCF-7 | breast: | n/a |
39 | chr22:20711027-20711077 | HMEC | breast: | n/a |
40 | chr22:20716554-20716604 | GM19239 | blood: | n/a |
41 | chr22:20714779-20714829 | HCT-116 | colon: | n/a |
42 | chr22:20715555-20715605 | SAEC | small airway: | n/a |
43 | chr22:20716864-20716914 | Caco-2 | colon: | n/a |
44 | chr22:20711027-20711077 | NT2-D1 | testis: | n/a |
45 | chr22:20716554-20716604 | GM06990 | blood: | n/a |
46 | chr22:20714779-20714829 | AG04449 | skin: | fetal |
47 | chr22:20714779-20714829 | LNCaP | prostate: | n/a |
48 | chr22:20713372-20713422 | GM12892 | blood: | n/a |
49 | chr22:20712476-20712526 | T-47D | breast: | n/a |
50 | chr22:20706928-20706978 | NB4 | blood: | n/a |
(count:13 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:20731915..20736379-chr22:20746331..20749449,6 | K562 | blood: | |
2 | chr22:20744625..20746451-chr22:20748310..20750058,3 | MCF-7 | breast: | |
3 | chr22:20731915..20735140-chr22:20745527..20749276,4 | K562 | blood: | |
4 | chr22:20724177..20725083-chr5:102804356..102805302,2 | MCF-7 | breast: | |
5 | chr22:20734100..20735721-chr22:20739123..20741298,2 | K562 | blood: | |
6 | chr22:20732956..20734641-chr22:20791336..20793024,2 | K562 | blood: | |
7 | chr22:20740340..20742875-chr22:20747087..20749280,2 | MCF-7 | breast: | |
8 | chr22:20734100..20735721-chr22:20739123..20741298,2 | K562 | blood: | |
9 | chr22:20726809..20729682-chr22:20738180..20739849,2 | K562 | blood: | |
10 | chr22:20735819..20738394-chr22:20739317..20742032,2 | K562 | blood: | |
11 | chr22:20735819..20738394-chr22:20739317..20742032,2 | K562 | blood: | |
12 | chr22:20740714..20742899-chr22:20744180..20745810,2 | K562 | blood: | |
13 | chr22:20733447..20735135-chr22:20753678..20755384,2 | K562 | blood: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
USP41 | TF binding region |
ZNF74 | TF binding region |
FAM230A | TF binding region |
USP41 | CpG island |
ZNF74 | CpG island |
FAM230A | CpG island |
ENSG00000161133 | chromatin interactions |
ENSG00000244486 | chromatin interactions |
ENSG00000185252 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs28641548 | chr22:20699016-20699017 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
2 | rs28517714 | chr22:20699051-20699052 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
3 | rs566160630 | chr22:20699222-20699223 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
4 | rs3966543 | chr22:20699690-20699691 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs9605574 | chr22:20700102-20700103 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs579287 | chr22:20701769-20701770 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs9625802 | chr22:20701824-20701825 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs472485 | chr22:20702138-20702139 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs9620901 | chr22:20702257-20702258 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
10 | rs200855967 | chr22:20702272-20702273 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs577606 | chr22:20702628-20702629 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs9620904 | chr22:20702787-20702788 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs670654 | chr22:20702832-20702833 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs58407922 | chr22:20702889-20702890 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs57325120 | chr22:20703076-20703077 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs61625249 | chr22:20703324-20703325 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
17 | rs3984722 | chr22:20703356-20703357 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs5992196 | chr22:20703490-20703491 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs3984717 | chr22:20703496-20703497 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs9614015 | chr22:20703530-20703531 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs3984715 | chr22:20703566-20703567 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
22 | rs3984714 | chr22:20703596-20703597 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs9614020 | chr22:20703627-20703628 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
24 | rs5993063 | chr22:20703675-20703676 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
25 | rs518868 | chr22:20703685-20703686 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
26 | rs199633272 | chr22:20703772-20703773 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
27 | rs4052354 | chr22:20707007-20707008 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs542848143 | chr22:20707019-20707020 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs2329337 | chr22:20707021-20707022 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs200252764 | chr22:20707028-20707029 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs528676041 | chr22:20707052-20707053 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs4141818 | chr22:20707076-20707077 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs147334439 | chr22:20707081-20707082 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs4141817 | chr22:20707097-20707098 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs2876820 | chr22:20707110-20707111 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs542803476 | chr22:20707112-20707113 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs2329338 | chr22:20707123-20707124 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs571635591 | chr22:20707129-20707130 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs4141816 | chr22:20707187-20707188 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs112916507 | chr22:20707191-20707192 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs554887243 | chr22:20707192-20707193 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs537579768 | chr22:20707204-20707205 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs377134786 | chr22:20707234-20707235 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs201037125 | chr22:20707262-20707263 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs376426152 | chr22:20707272-20707273 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs2329339 | chr22:20707284-20707285 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs112446297 | chr22:20707311-20707312 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs112930875 | chr22:20707321-20707322 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs111603322 | chr22:20707329-20707330 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs368786015 | chr22:20707333-20707334 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22102821 | CNVD |
Autism | 22495311 | CNVD |
Lung cancer | 18438408 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21858162 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Prostate cancer | 18632612 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Autism | 19521722 | CNVD |
Digeorge syndrome | 19521722 | CNVD |
Autism | 19955444 | CNVD |
Schizophrenia | 19955444 | CNVD |
Mental retardation | 17124404 | CNVD |
Tourette syndrome | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Schizophrenia | 17160897 | CNVD |
Cancer | 17160897 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
22q11.2 deletion syndrome | 22563040 | CNVD |
cardiac septal defect | 19239688 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Developmental delay | 21147756 | CNVD |
Type 2 diabetes | 21526130 | CNVD |
Ependymoma | 20639864 | CNVD |
Cancer | 20164919 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Schizophrenia | 21399695 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Prader-willi syndrome | 20588305 | CNVD |
T-cell acute lymphoblastic leukemia | 21980252 | CNVD |
22q11.22 microdeletion syndrome | 19193630 | CNVD |
Cancer | 20164920 | CNVD |
Non-syndromic sensorineural hearing loss | 17289997 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Schizophrenia | 17989066 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Schizophrenia | 20967226 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:20707000-20707400 | Enhancers | HMEC | breast |
2 | chr22:20707600-20721200 | Weak transcription | Right Atrium | heart |
3 | chr22:20708600-20708800 | Active TSS | H1 Derived Mesenchymal Stem Cells | ES cell derived |
4 | chr22:20708600-20709200 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
5 | chr22:20708800-20709000 | Flanking Active TSS | H1 Derived Mesenchymal Stem Cells | ES cell derived |
6 | chr22:20709000-20716200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
7 | chr22:20716200-20716400 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
8 | chr22:20716400-20716600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
9 | chr22:20716800-20717000 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
10 | chr22:20716800-20717000 | Enhancers | Monocytes-CD14+_RO01746 | blood |
11 | chr22:20717000-20717600 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
12 | chr22:20717000-20718000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
13 | chr22:20717600-20718600 | Enhancers | Monocytes-CD14+_RO01746 | blood |
14 | chr22:20717600-20719800 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
15 | chr22:20718000-20718600 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
16 | chr22:20718000-20718800 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
17 | chr22:20718000-20719000 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
18 | chr22:20718000-20719400 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
19 | chr22:20718000-20719800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
20 | chr22:20718000-20719800 | Enhancers | Primary monocytes fromperipheralblood | blood |
21 | chr22:20718000-20719800 | Enhancers | Primary T cells fromperipheralblood | blood |
22 | chr22:20718000-20719800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
23 | chr22:20718000-20719800 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
24 | chr22:20718000-20719800 | Enhancers | NHLF | lung |
25 | chr22:20718000-20720000 | Enhancers | Primary T cells from cord blood | blood |
26 | chr22:20718000-20720000 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
27 | chr22:20718200-20719400 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
28 | chr22:20718200-20719800 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
29 | chr22:20718600-20719000 | Enhancers | Fetal Thymus | thymus |
30 | chr22:20718600-20719000 | Flanking Active TSS | Monocytes-CD14+_RO01746 | blood |
31 | chr22:20718600-20719200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
32 | chr22:20718600-20719800 | Enhancers | Primary T helper cells fromperipheralblood | blood |
33 | chr22:20718600-20719800 | Enhancers | Osteobl | bone |
34 | chr22:20719000-20720000 | Enhancers | Monocytes-CD14+_RO01746 | blood |
35 | chr22:20719200-20719400 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
36 | chr22:20721200-20721600 | Strong transcription | Right Atrium | heart |
37 | chr22:20721600-20743400 | Weak transcription | Right Atrium | heart |
38 | chr22:20724000-20727600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
39 | chr22:20725000-20725400 | Enhancers | HUES64 Cell Line | embryonic stem cell |
40 | chr22:20725200-20725800 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
41 | chr22:20725600-20726000 | Active TSS | ES-I3 Cell Line | embryonic stem cell |
42 | chr22:20725600-20726200 | Active TSS | HUES64 Cell Line | embryonic stem cell |
43 | chr22:20725600-20726200 | Active TSS | iPS-15b Cell Line | embryonic stem cell |
44 | chr22:20725600-20726200 | Active TSS | iPS-20b Cell Line | embryonic stem cell |
45 | chr22:20725800-20728000 | Enhancers | GM12878-XiMat | blood |
46 | chr22:20726000-20726800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
47 | chr22:20726000-20728200 | Enhancers | Fetal Thymus | thymus |
48 | chr22:20726200-20726800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
49 | chr22:20726200-20727400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
50 | chr22:20726800-20727000 | Flanking Active TSS | ES-I3 Cell Line | embryonic stem cell |