Variant report

Variant	nsv980149
Chromosome Location	chr4:119065788-119066379
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 71 )

Variant overlapped rSNPs/rCNVs (count:23 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs374183559	chr4:119065837-119065838	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs541199159	chr4:119065858-119065859	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs551192162	chr4:119065870-119065871	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs571235411	chr4:119065884-119065885	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs200615210	chr4:119065901-119065902	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs397995126	chr4:119065912-119065913	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs180803596	chr4:119065943-119065944	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs547453555	chr4:119065954-119065955	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs567547888	chr4:119065963-119065964	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs536201158	chr4:119065973-119065974	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs530177564	chr4:119066059-119066060	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs143125048	chr4:119066074-119066075	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs34176697	chr4:119066081-119066082	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs569751603	chr4:119066131-119066132	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs539093630	chr4:119066132-119066133	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs148254542	chr4:119066147-119066148	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs572238343	chr4:119066176-119066177	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs534675666	chr4:119066228-119066229	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs4834667	chr4:119066243-119066244	Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
20	rs140392522	chr4:119066295-119066296	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs543767911	chr4:119066297-119066298	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs563859402	chr4:119066317-119066318	Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs577390161	chr4:119066373-119066374	Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:71)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Breast cancer	16272173	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Lung cancer	18438408	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	21183584	CNVD
primary effusion lymphomas	17116491	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17133270	CNVD
Colorectal cancer	20459617	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Breast cancer	17393978	CNVD
Esophageal cancer	21851588	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	16272173	CNVD
Testicular germ cell tumor	18059402	CNVD
Ovarian cancer	22174824	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Myelofibrosis	22110671	CNVD
Neuroblastoma	21899760	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Autism	19246517	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:119052200-119068400	Strong transcription	Dnd41	blood

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