Variant report

Variant nsv981098
Chromosome Location chr6:2008599-2102267
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:604 , 50 per page) page: 1 2 3 4 5 6 7 ... 13
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:1985000-2010200 Weak transcription Fetal Intestine Large intestine
2 chr6:1988400-2008600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr6:1990200-2008600 Weak transcription Pancreas Pancrea
4 chr6:1990400-2010800 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr6:1992800-2010200 Weak transcription Fetal Intestine Small intestine
6 chr6:1993000-2021200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr6:2000000-2021200 Weak transcription Small Intestine intestine
8 chr6:2001000-2009600 Weak transcription Primary hematopoietic stem cells blood
9 chr6:2002600-2008600 Weak transcription Gastric stomach
10 chr6:2002800-2008800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr6:2006200-2034800 Weak transcription HepG2 liver
12 chr6:2007600-2008600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr6:2008200-2021200 Weak transcription Left Ventricle heart
14 chr6:2008400-2009800 Enhancers NHEK skin
15 chr6:2008600-2008800 Enhancers Gastric stomach
16 chr6:2008600-2008800 Enhancers Pancreas Pancrea
17 chr6:2008600-2009000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
18 chr6:2008600-2009200 Enhancers Muscle Satellite Cultured Cells --
19 chr6:2008600-2009200 Enhancers Osteobl bone
20 chr6:2008600-2009600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr6:2008600-2009600 Enhancers HMEC breast
22 chr6:2008600-2009800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr6:2008600-2009800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr6:2008800-2009200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr6:2008800-2010400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr6:2008800-2011800 Weak transcription Gastric stomach
27 chr6:2008800-2012400 Weak transcription Pancreas Pancrea
28 chr6:2009000-2010200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr6:2009200-2009600 Enhancers GM12878-XiMat blood
30 chr6:2009200-2011600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr6:2009600-2010800 ZNF genes & repeats Primary hematopoietic stem cells blood
32 chr6:2009600-2021000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr6:2009800-2021000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr6:2010200-2010400 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
35 chr6:2010200-2010400 ZNF genes & repeats Fetal Intestine Small intestine
36 chr6:2010200-2010600 ZNF genes & repeats Fetal Intestine Large intestine
37 chr6:2010400-2011800 Weak transcription Fetal Intestine Small intestine
38 chr6:2010800-2011000 Enhancers Rectal Mucosa Donor 31 rectum
39 chr6:2010800-2011400 Weak transcription Primary hematopoietic stem cells blood
40 chr6:2011000-2021200 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr6:2011400-2012200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr6:2011400-2012800 ZNF genes & repeats Primary hematopoietic stem cells blood
43 chr6:2011800-2012000 ZNF genes & repeats Fetal Intestine Small intestine
44 chr6:2011800-2012000 ZNF genes & repeats Gastric stomach
45 chr6:2012000-2012400 Weak transcription Fetal Intestine Small intestine
46 chr6:2012000-2013200 Weak transcription Gastric stomach
47 chr6:2013800-2015000 Weak transcription Dnd41 blood
48 chr6:2015000-2016200 ZNF genes & repeats Dnd41 blood
49 chr6:2015200-2016200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr6:2015800-2016000 Active TSS Aorta Aorta

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