Variant report

Variant	nsv981156
Chromosome Location	chr6:66498373-66502695
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 81 )

Variant overlapped rSNPs/rCNVs (count:47 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs149641208	chr6:66500020-66500021	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs559973195	chr6:66500125-66500126	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs146166871	chr6:66500154-66500155	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs547512377	chr6:66500173-66500174	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs35390774	chr6:66500218-66500219	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs372898706	chr6:66500224-66500225	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs76109136	chr6:66500225-66500226	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs529762731	chr6:66500263-66500264	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs189846184	chr6:66500306-66500307	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs569570779	chr6:66500309-66500310	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs541971463	chr6:66500313-66500314	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs538902068	chr6:66500322-66500323	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs552087694	chr6:66500323-66500324	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs572492268	chr6:66500343-66500344	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs140176000	chr6:66500358-66500359	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs75234007	chr6:66500359-66500360	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs2814124	chr6:66500426-66500427	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs373860567	chr6:66500453-66500454	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs182296457	chr6:66500458-66500459	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs13192228	chr6:66500515-66500516	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs577204185	chr6:66500527-66500528	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs541708943	chr6:66500563-66500564	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs553750151	chr6:66500604-66500605	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs200420411	chr6:66500618-66500619	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs542403606	chr6:66500623-66500624	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs562285940	chr6:66500661-66500662	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs529769888	chr6:66500782-66500783	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs543180000	chr6:66500801-66500802	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs528210702	chr6:66500811-66500812	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs563277139	chr6:66500833-66500834	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs546372705	chr6:66500873-66500874	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs187809983	chr6:66500900-66500901	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs552047418	chr6:66500917-66500918	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs191473826	chr6:66500919-66500920	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs71002347	chr6:66500974-66500975	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs531996454	chr6:66501005-66501006	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs528379358	chr6:66501050-66501051	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs547946642	chr6:66501058-66501059	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs568183259	chr6:66501072-66501073	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs537539068	chr6:66501109-66501110	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs143837373	chr6:66501131-66501132	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs183313325	chr6:66501134-66501135	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs10944842	chr6:66501135-66501136	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs564631415	chr6:66501140-66501141	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs77703278	chr6:66501158-66501159	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs569143688	chr6:66501179-66501180	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs58811118	chr6:66501188-66501189	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:81)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Colorectal cancer	16272173	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	21364760	CNVD
Prostate cancer	16573809	CNVD
Ovarian cancer	19835627	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Glioblastoma multiforme	22286061	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16272173	CNVD
Developmental delay	21147756	CNVD
small cell lung cancer	20016488	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	20164919	CNVD
Bipolar disorder	19114987	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:66500000-66501200	Enhancers	Fetal Stomach	stomach
2	chr6:66500400-66501000	Enhancers	Fetal Lung	lung

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