Variant report

Variant	nsv981180
Chromosome Location	chr6:121728717-121731853
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 106 )
Associated
traits (count: 107 )

Variant overlapped rSNPs/rCNVs (count:106 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs141233102	chr6:121728755-121728756	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs572452426	chr6:121728767-121728768	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs144638664	chr6:121728768-121728769	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs77414500	chr6:121728780-121728781	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs184091400	chr6:121728795-121728796	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs111633380	chr6:121729008-121729009	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs368553739	chr6:121729023-121729024	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs188822090	chr6:121729060-121729061	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs551658946	chr6:121729065-121729066	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs571407866	chr6:121729199-121729200	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs148983553	chr6:121729213-121729214	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs547581677	chr6:121729257-121729258	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs567455085	chr6:121729281-121729282	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs2038837	chr6:121729378-121729379	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs180746443	chr6:121729380-121729381	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs2038836	chr6:121729398-121729399	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs139886707	chr6:121729420-121729421	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs372940477	chr6:121729422-121729423	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs571477818	chr6:121729437-121729438	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs35762057	chr6:121729458-121729459	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs538873330	chr6:121729544-121729545	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs144375512	chr6:121729547-121729548	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs184442042	chr6:121729573-121729574	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs190452429	chr6:121729579-121729580	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs541309030	chr6:121729580-121729581	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs73530247	chr6:121729582-121729583	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs541608059	chr6:121729598-121729599	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs543934731	chr6:121729605-121729606	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs376749978	chr6:121729648-121729649	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs376926317	chr6:121729649-121729650	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs563588581	chr6:121729656-121729657	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs75472163	chr6:121729678-121729679	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs56013290	chr6:121729689-121729690	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs12190256	chr6:121729745-121729746	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs114642743	chr6:121729770-121729771	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs143799744	chr6:121729784-121729785	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs564245635	chr6:121729788-121729789	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs534948238	chr6:121729789-121729790	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs533281216	chr6:121729869-121729870	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs77036324	chr6:121729978-121729979	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs547693573	chr6:121729987-121729988	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs201607230	chr6:121729993-121729994	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs386705330	chr6:121729995-121729996	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs200175882	chr6:121729999-121730000	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs200947790	chr6:121730000-121730001	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs202134107	chr6:121730002-121730003	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs567515083	chr6:121730056-121730057	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs74363630	chr6:121730064-121730065	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs536441724	chr6:121730067-121730068	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs549857116	chr6:121730110-121730111	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:107)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
T-cell lymphomas	19863542	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Prostate cancer	18632612	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	19242612	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Lung adenocarcinoma	21935476	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
Developmental delay	19490664	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Burkitt''s lymphoma	18698080	CNVD
Ovarian cancer	21720365	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	16461572	CNVD
Neurocytoma	17123091	CNVD
Breast cancer	21364760	CNVD
Chordoma	21602918	CNVD
Kartagener syndrome	16639409	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17133270	CNVD
Follicular lymphoma	18703704	CNVD
Mental retardation	17621639	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Metastatic melanoma	18483359	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Breast cancer	18698023	CNVD
Mental retardation	18854857	CNVD
Leukemia	18688285	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
Liver carcinoma	19366792	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Ependymoma	18628472	CNVD
Ewing''s sarcoma	18628472	CNVD
Leukemia	18628472	CNVD
Breast cancer	21611746	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:121727400-121731600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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